PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG021790.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Nin-like
Protein Properties Length: 449aa    MW: 49500.2 Da    PI: 5.8297
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG021790.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK23.88.8e-08400425126
            RWP-RK   1 aekeisledlskyFslpikdAAkeLg 26 
                       aek+isle+l++yFs+++k+AAk+Lg
  TRIDC3AG021790.5 400 AEKTISLEVLQQYFSGSLKNAAKSLG 425
                       589**********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    
MMYMFSVDGD NAGELGLPGR VYKQKVPEWT PNVQYYSSTE YPRLNHAISY NVHGTVALPV  60
FDPSVQSCIA VVELIMTSKK INYADEVDKV CKALEAVNLK STEILEHPNV QICNEGRQSA  120
LVEILEILTV VCEEHKLPLA QTWVPCKYRS VLAHGGGVKK SCLSFDGSCM GEVCMSTSDV  180
AFHVIDAHMW GFRDACVEHH LQKGQGVSGK AFIYHRPCFS KDISQFCKLE YPLVHYARMF  240
GLAGCFAICL QSPYTGDDYY MLEFFLPPSC KEEDDQNALL ESILGLINQC LRNLKVAGNG  300
ESNEASLQLS NVIMIESEDF KTNVHFENSE GFRESPEGDT HGGAHEFDKA NSKVSEGHLL  360
ADDNSQNNGV SVSRPNGSAA SDSSLLHKNG KPPERRRGKA EKTISLEVLQ QYFSGSLKNA  420
AKSLGGTLLI FSLLSKQILG FLSLTLSDC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64530.11e-175Nin-like family protein