PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG021580.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 594aa MW: 64774.6 Da PI: 6.5385

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG021580.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.6	9.2e-13	440	486	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq TRIDC3AG021580.5 440 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYITDLQ 486 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 594 aa Download sequence
VEEDGANGGN GGAWTEEDRD LSTTVLGRDA FAYLTKGGGT ISEGLVAASS PVDLQNKLQE 60 LIESEHPGAG WNYAIFWQLS RTKSGDLVLG WGDGSCREPN DAELAAAASA GNDDAKQRMR 120 KRVLQRLHKA FGGADEEDYA PTIGQVTDTE MFFLASMYFA FPRRAGAPGQ VFAAGLPLWV 180 PNSERNVFPA NYCYRGYLAS TAGFRTILLV PFETGVLELG SMQQVAESSD TLQTIKSVFA 240 GTGGNKDIIP SREGNGHIER SPGLAKIFGK DLNLGRSSAG PVIGVSKVDE RPWEQRTAGG 300 GSSLLPNVQK GLQSFTWSQA RGLNSHQQKF GNGILIVSNE ATHGNNRTAD SSTTTQFQLQ 360 KPLQMVNQQQ LQPQAPRQID FSAGTSSKSG VLVTRAAVLD GDSSEVNGLC KEEGTTPVIE 420 DRRPRKRGRK PANGREEPLN HVEAERQRRE KLNQRFYALR AVVPNISKMD KASLLGDAIA 480 YITDLQKKLK DMETERERFL ESGMVDPRER APRPEVDIQV VQDEVLVRVM SPLENHPVKK 540 VFEAFEEADV RVGESKLTGN NGTVVHSFII KCPGSEQQTR EKVIAAMSRA MSSV

Sequence ? help Back to Top

Protein Sequence Length: 594 aa Download sequence

VEEDGANGGN GGAWTEEDRD LSTTVLGRDA FAYLTKGGGT ISEGLVAASS PVDLQNKLQE  60
LIESEHPGAG WNYAIFWQLS RTKSGDLVLG WGDGSCREPN DAELAAAASA GNDDAKQRMR  120
KRVLQRLHKA FGGADEEDYA PTIGQVTDTE MFFLASMYFA FPRRAGAPGQ VFAAGLPLWV  180
PNSERNVFPA NYCYRGYLAS TAGFRTILLV PFETGVLELG SMQQVAESSD TLQTIKSVFA  240
GTGGNKDIIP SREGNGHIER SPGLAKIFGK DLNLGRSSAG PVIGVSKVDE RPWEQRTAGG  300
GSSLLPNVQK GLQSFTWSQA RGLNSHQQKF GNGILIVSNE ATHGNNRTAD SSTTTQFQLQ  360
KPLQMVNQQQ LQPQAPRQID FSAGTSSKSG VLVTRAAVLD GDSSEVNGLC KEEGTTPVIE  420
DRRPRKRGRK PANGREEPLN HVEAERQRRE KLNQRFYALR AVVPNISKMD KASLLGDAIA  480
YITDLQKKLK DMETERERFL ESGMVDPRER APRPEVDIQV VQDEVLVRVM SPLENHPVKK  540
VFEAFEEADV RVGESKLTGN NGTVVHSFII KCPGSEQQTR EKVIAAMSRA MSSV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	422	430	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17880.1	1e-68	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG021580.5