PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG021580.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 618aa MW: 67546.2 Da PI: 7.2422

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG021580.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.6	9.7e-13	464	510	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq TRIDC3AG021580.4 464 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYITDLQ 510 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 618 aa Download sequence
MVMKMEVEED GANGGNGGAW TEEDRDLSTT VLGRDAFAYL TKGGGTISEG LVAASSPVDL 60 QNKLQELIES EHPGAGWNYA IFWQLSRTKS GDLVLGWGDG SCREPNDAEL AAAASAGNDD 120 AKQRMRKRVL QRLHKAFGGA DEEDYAPTIG QVTDTEMFFL ASMYFAFPRR AGAPGQVFAA 180 GLPLWVPNSE RNVFPANYCY RGYLASTAGF RTILLVPFET GVLELGSMQQ VAESSDTLQT 240 IKSVFAGTGG NKDIIPSREG NGHIERSPGL AKIFGKDLNL GRSSAGPVIG VSKVDERPWE 300 QRTAGGGSSL LPNVQKGLQS FTWSQARGLN SHQQKFGNGI LIVSNEATHG NNRTADSSTT 360 TQFQLQKAPQ LQKLPLLQKP PQLVKPLQMV NQQQLQPQAP RQIDFSAGTS SKSGVLVTRA 420 AVLDGDSSEV NGLCKEEGTT PVIEDRRPRK RGRKPANGRE EPLNHVEAER QRREKLNQRF 480 YALRAVVPNI SKMDKASLLG DAIAYITDLQ KKLKDMETER ERFLESGMVD PRERAPRPEV 540 DIQVVQDEVL VRVMSPLENH PVKKVFEAFE EADVRVGESK LTGNNGTVVH SFIIKCPGSE 600 QQTREKVIAA MSRAMSSV

Sequence ? help Back to Top

Protein Sequence Length: 618 aa Download sequence

MVMKMEVEED GANGGNGGAW TEEDRDLSTT VLGRDAFAYL TKGGGTISEG LVAASSPVDL  60
QNKLQELIES EHPGAGWNYA IFWQLSRTKS GDLVLGWGDG SCREPNDAEL AAAASAGNDD  120
AKQRMRKRVL QRLHKAFGGA DEEDYAPTIG QVTDTEMFFL ASMYFAFPRR AGAPGQVFAA  180
GLPLWVPNSE RNVFPANYCY RGYLASTAGF RTILLVPFET GVLELGSMQQ VAESSDTLQT  240
IKSVFAGTGG NKDIIPSREG NGHIERSPGL AKIFGKDLNL GRSSAGPVIG VSKVDERPWE  300
QRTAGGGSSL LPNVQKGLQS FTWSQARGLN SHQQKFGNGI LIVSNEATHG NNRTADSSTT  360
TQFQLQKAPQ LQKLPLLQKP PQLVKPLQMV NQQQLQPQAP RQIDFSAGTS SKSGVLVTRA  420
AVLDGDSSEV NGLCKEEGTT PVIEDRRPRK RGRKPANGRE EPLNHVEAER QRREKLNQRF  480
YALRAVVPNI SKMDKASLLG DAIAYITDLQ KKLKDMETER ERFLESGMVD PRERAPRPEV  540
DIQVVQDEVL VRVMSPLENH PVKKVFEAFE EADVRVGESK LTGNNGTVVH SFIIKCPGSE  600
QQTREKVIAA MSRAMSSV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	446	454	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	5e-62	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG021580.4