PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG021580.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 661aa MW: 72169.4 Da PI: 8.5623

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG021580.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.4	1.1e-12	507	553	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq TRIDC3AG021580.1 507 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYITDLQ 553 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 661 aa Download sequence
REDPGFSPSR LRRQRSGLAV AGPPALDFAS PLPIRARDPR SGLMVMKMEV EEDGANGGNG 60 GAWTEEDRDL STTVLGRDAF AYLTKGGGTI SEGLVAASSP VDLQNKLQEL IESEHPGAGW 120 NYAIFWQLSR TKSGDLVLGW GDGSCREPND AELAAAASAG NDDAKQRMRK RVLQRLHKAF 180 GGADEEDYAP TIGQVTDTEM FFLASMYFAF PRRAGAPGQV FAAGLPLWVP NSERNVFPAN 240 YCYRGYLAST AGFRTILLVP FETGVLELGS MQQVAESSDT LQTIKSVFAG TGGNKDIIPS 300 REGNGHIERS PGLAKIFGKD LNLGRSSAGP VIGVSKVDER PWEQRTAGGG SSLLPNVQKG 360 LQSFTWSQAR GLNSHQQKFG NGILIVSNEA THGNNRTADS STTTQFQLQK APQLQKLPLL 420 QKPPQLVKPL QMVNQQQLQP QAPRQIDFSA GTSSKSGVLV TRAAVLDGDS SEVNGLCKEE 480 GTTPVIEDRR PRKRGRKPAN GREEPLNHVE AERQRREKLN QRFYALRAVV PNISKMDKAS 540 LLGDAIAYIT DLQKKLKDME TERERFLESG MVDPRERAPR PEVDIQVVQD EVLVRVMSPL 600 ENHPVKKVFE AFEEADVRVG ESKLTGNNGT VVHSFIIKCP GSEQQTREKV IAAMSRAMSS 660 V

Sequence ? help Back to Top

Protein Sequence Length: 661 aa Download sequence

REDPGFSPSR LRRQRSGLAV AGPPALDFAS PLPIRARDPR SGLMVMKMEV EEDGANGGNG  60
GAWTEEDRDL STTVLGRDAF AYLTKGGGTI SEGLVAASSP VDLQNKLQEL IESEHPGAGW  120
NYAIFWQLSR TKSGDLVLGW GDGSCREPND AELAAAASAG NDDAKQRMRK RVLQRLHKAF  180
GGADEEDYAP TIGQVTDTEM FFLASMYFAF PRRAGAPGQV FAAGLPLWVP NSERNVFPAN  240
YCYRGYLAST AGFRTILLVP FETGVLELGS MQQVAESSDT LQTIKSVFAG TGGNKDIIPS  300
REGNGHIERS PGLAKIFGKD LNLGRSSAGP VIGVSKVDER PWEQRTAGGG SSLLPNVQKG  360
LQSFTWSQAR GLNSHQQKFG NGILIVSNEA THGNNRTADS STTTQFQLQK APQLQKLPLL  420
QKPPQLVKPL QMVNQQQLQP QAPRQIDFSA GTSSKSGVLV TRAAVLDGDS SEVNGLCKEE  480
GTTPVIEDRR PRKRGRKPAN GREEPLNHVE AERQRREKLN QRFYALRAVV PNISKMDKAS  540
LLGDAIAYIT DLQKKLKDME TERERFLESG MVDPRERAPR PEVDIQVVQD EVLVRVMSPL  600
ENHPVKKVFE AFEEADVRVG ESKLTGNNGT VVHSFIIKCP GSEQQTREKV IAAMSRAMSS  660
V

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	489	497	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	1e-61	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG021580.1