PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG021410.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 374aa MW: 41008.9 Da PI: 5.6402

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG021410.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58	1.7e-18	72	162	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k +++s+v +l lp +f+++h k +++ ++lede+g ++ k+ + +++ l++GW++F+ +g+k+gD+vvF+l+++ +f + TRIDC3AG021410.5 72 FVKYMLHSHVVHGFWLGLPSDFCNKHLPK--KDTAIVLEDEDGHNYDAKY--LGAKQG--LSAGWRGFAINHGIKVGDVVVFQLVSSAKF--K 156 8999*****************999533..5679***********..888877..9********************9876666..9 PP EEEE-S CS B3 94 vkvfrk 99 v ++r+ TRIDC3AG021410.5 157 VYILRA 162 999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MEQKLNMSTP GLGLVESGGS NSSKSDVDDD LVPMVAAVNC QKTCASVQGN FGSAMERAEE 60 VLVKLPAEHP SFVKYMLHSH VVHGFWLGLP SDFCNKHLPK KDTAIVLEDE DGHNYDAKYL 120 GAKQGLSAGW RGFAINHGIK VGDVVVFQLV SSAKFKVYIL RANNFTTTDG ALGLLCLEDG 180 KEKIPKEESS IDVKSEEKPK VAQSDSSNLA SESITDGIKF SDTVIDFDNV KDFSSFSIVV 240 DGLVIDCEFP DHLRETYYEL CCAQKSFLHK ELLKGLNLTL VVGAIMETID IAEGIRACKA 300 RTPSRRDFVV WKNLQALKLL GMNVDFLLKR VDDLLSLPAR PRAPAEVKLE RARTVAKIKA 360 VVQDFECEGH SGGD

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MEQKLNMSTP GLGLVESGGS NSSKSDVDDD LVPMVAAVNC QKTCASVQGN FGSAMERAEE  60
VLVKLPAEHP SFVKYMLHSH VVHGFWLGLP SDFCNKHLPK KDTAIVLEDE DGHNYDAKYL  120
GAKQGLSAGW RGFAINHGIK VGDVVVFQLV SSAKFKVYIL RANNFTTTDG ALGLLCLEDG  180
KEKIPKEESS IDVKSEEKPK VAQSDSSNLA SESITDGIKF SDTVIDFDNV KDFSSFSIVV  240
DGLVIDCEFP DHLRETYYEL CCAQKSFLHK ELLKGLNLTL VVGAIMETID IAEGIRACKA  300
RTPSRRDFVV WKNLQALKLL GMNVDFLLKR VDDLLSLPAR PRAPAEVKLE RARTVAKIKA  360
VVQDFECEGH SGGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	1e-37	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG021410.5