PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC3AG020650.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 934aa MW: 102678 Da PI: 5.0496

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG020650.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38.9	2.1e-12	10	48	9	48
HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 9 dellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 d++l +av+ + g++Wk+Ia++++ Rt+ qc +rwqk+l TRIDC3AG020650.7 10 DDILSRAVQTYNGKNWKKIAECFP-DRTDVQCLHRWQKVL 48 67899*****************.**********986 PP
2	Myb_DNA-binding	61.3	2.1e-19	54	100	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd+++v+ vk++G++ W+tIa+ ++ gR +kqc++rw+++l TRIDC3AG020650.7 54 KGPWSKEEDDIIVEMVKKYGPKKWSTIAQALP-GRIGKQCRERWHNHL 100 79****************************.***********97 PP
3	Myb_DNA-binding	49.1	1.3e-15	106	148	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+ l++a++++G++ W+ + ++ gRt++++k++w+ TRIDC3AG020650.7 106 KDAWTQEEEITLIHAHRMYGNK-WAELTKFLP-GRTDNSIKNHWN 148 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 934 aa Download sequence
AIYCPNGWMD DILSRAVQTY NGKNWKKIAE CFPDRTDVQC LHRWQKVLNP ELIKGPWSKE 60 EDDIIVEMVK KYGPKKWSTI AQALPGRIGK QCRERWHNHL NPGINKDAWT QEEEITLIHA 120 HRMYGNKWAE LTKFLPGRTD NSIKNHWNSS VKKKIDSYMS SGLLAQVSRL PLIEHHAHFN 180 SSPAITQQNS EDSDSNAVRE VEDSSGCSQS SLAMVSCSQA QDTNLALSCD LHVNADPSKT 240 EAHDSQSSMC QEGYTSTEGV ASALSEVHCH ASSSRFGSDK LLQQEISQRM DLQMDIDETP 300 GNSMFENNQT ICSTSNNERP MLQYEIAPDM PISVLTNVSG AEPKLHFMSE ADFSSPNCLK 360 SELWQDVSFQ SLLSGPDVVD ADSLSRLNHH SDTHSSEADT HFLAAPNPSH TSNPSSMMMA 420 AYGQDPSLSV PQSLIPNGLS DVADEKSREM QVSGSEMITC MHDSFGDSEQ FATPGSTDGR 480 HGASAIIERI PEYGDKQLTD AEEPASSMAK EPPLAQGEAA SDEKQDKGAL FYEPPRFPSM 540 DVPFVSCDLV TSGDLQEYSP LGIRQLMRST MSVTTPLRLW GSPTHDESPD VVLKSAAKSF 600 ISTPSILKKR PRDLSSPTLE KGIEKKSRTE QDSGVLGTSS VSAQTSCMHA IKDKGIVTES 660 VFCTNRSSSF KPLEKKLEFC DENKGNLGES EQAKDGRNAQ NNHPVDEHAR GEQCSTANMV 720 NINDEPPATV LVEHKGNDIS DHGANAMYQK MNTNLQALSA CKETFAKSKS GELIAEKSSP 780 CIQMDYEYVN ILADTPGVKR GLESPSAWKS PWFIDMQYKG SYFISPADTT YDALGLMKRI 840 NVQSASALAD AREVLASGSQ CGNKDFDEEN KENVDAENET GTGKPQNKIM AEARVLDFNE 900 CATPVRTADS SVGGRLTKSL SSPIPSSHLL KKFR

Sequence ? help Back to Top

Protein Sequence Length: 934 aa Download sequence

AIYCPNGWMD DILSRAVQTY NGKNWKKIAE CFPDRTDVQC LHRWQKVLNP ELIKGPWSKE  60
EDDIIVEMVK KYGPKKWSTI AQALPGRIGK QCRERWHNHL NPGINKDAWT QEEEITLIHA  120
HRMYGNKWAE LTKFLPGRTD NSIKNHWNSS VKKKIDSYMS SGLLAQVSRL PLIEHHAHFN  180
SSPAITQQNS EDSDSNAVRE VEDSSGCSQS SLAMVSCSQA QDTNLALSCD LHVNADPSKT  240
EAHDSQSSMC QEGYTSTEGV ASALSEVHCH ASSSRFGSDK LLQQEISQRM DLQMDIDETP  300
GNSMFENNQT ICSTSNNERP MLQYEIAPDM PISVLTNVSG AEPKLHFMSE ADFSSPNCLK  360
SELWQDVSFQ SLLSGPDVVD ADSLSRLNHH SDTHSSEADT HFLAAPNPSH TSNPSSMMMA  420
AYGQDPSLSV PQSLIPNGLS DVADEKSREM QVSGSEMITC MHDSFGDSEQ FATPGSTDGR  480
HGASAIIERI PEYGDKQLTD AEEPASSMAK EPPLAQGEAA SDEKQDKGAL FYEPPRFPSM  540
DVPFVSCDLV TSGDLQEYSP LGIRQLMRST MSVTTPLRLW GSPTHDESPD VVLKSAAKSF  600
ISTPSILKKR PRDLSSPTLE KGIEKKSRTE QDSGVLGTSS VSAQTSCMHA IKDKGIVTES  660
VFCTNRSSSF KPLEKKLEFC DENKGNLGES EQAKDGRNAQ NNHPVDEHAR GEQCSTANMV  720
NINDEPPATV LVEHKGNDIS DHGANAMYQK MNTNLQALSA CKETFAKSKS GELIAEKSSP  780
CIQMDYEYVN ILADTPGVKR GLESPSAWKS PWFIDMQYKG SYFISPADTT YDALGLMKRI  840
NVQSASALAD AREVLASGSQ CGNKDFDEEN KENVDAENET GTGKPQNKIM AEARVLDFNE  900
CATPVRTADS SVGGRLTKSL SSPIPSSHLL KKFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	1e-150	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG020650.7