PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG020650.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 1004aa MW: 110152 Da PI: 5.3024

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG020650.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28	5e-09	50	76	1	27
TSSS-HHHHHHHHHHHHHTTTT-HHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktI 27 +g+WT+eEd++l +av+ + g++Wk+I TRIDC3AG020650.5 50 KGNWTPEEDDILSRAVQTYNGKNWKKI 76 79************************9 PP
2	Myb_DNA-binding	61.1	2.3e-19	124	170	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd+++v+ vk++G++ W+tIa+ ++ gR +kqc++rw+++l TRIDC3AG020650.5 124 KGPWSKEEDDIIVEMVKKYGPKKWSTIAQALP-GRIGKQCRERWHNHL 170 79****************************.***********97 PP
3	Myb_DNA-binding	49	1.4e-15	176	218	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+ l++a++++G++ W+ + ++ gRt++++k++w+ TRIDC3AG020650.5 176 KDAWTQEEEITLIHAHRMYGNK-WAELTKFLP-GRTDNSIKNHWN 218 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1004 aa Download sequence
MTSDKGKASK KAGEASGQPS TTHEGKVSNE PQRQRSLNGR TTGPTRRSTK GNWTPEEDDI 60 LSRAVQTYNG KNWKKIGTPP YTFCFLTSLS TDILPSFPAE CFPDRTDVQC LHRWQKVLNP 120 ELIKGPWSKE EDDIIVEMVK KYGPKKWSTI AQALPGRIGK QCRERWHNHL NPGINKDAWT 180 QEEEITLIHA HRMYGNKWAE LTKFLPGRTD NSIKNHWNSS VKKKIDSYMS SGLLAQVSRL 240 PLIEHHAHFN SSPAITQQNS EDSDSNAVRE VEDSSGCSQS SLAMVSCSQA QDTNLALSCD 300 LHVNADPSKT EAHDSQSSMC QEGYTSTEGV ASALSEVHCH ASSSRFGSDK LLQQEISQRM 360 DLQMDIDETP GNSMFENNQT ICSTSNNERP MLQYEIAPDM PISVLTNVSG AEPKLHFMSE 420 ADFSSPNCLK SELWQDVSFQ SLLSGPDVVD ADSLSRLNHH SDTHSSEADT HFLAAPNPSH 480 TSNPSSMMMA AYGQDPSLSV PQSLIPNGLS DVADEKSREM QVSGSEMITC MHDSFGDSEQ 540 FATPGSTDGR HGASAIIERI PEYGDKQLTD AEEPASSMAK EPPLAQGEAA SDEKQDKGAL 600 FYEPPRFPSM DVPFVSCDLV TSGDLQEYSP LGIRQLMRST MSVTTPLRLW GSPTHDESPD 660 VVLKSAAKSF ISTPSILKKR PRDLSSPTLE KGIEKKSRTE QDSGVLGTSS VSAQTSCMHA 720 IKDKGIVTES VFCTNRSSSF KPLEKKLEFC DENKGNLGES EQAKDGRNAQ NNHPVDEHAR 780 GEQCSTANMV NINDEPPATV LVEHKGNDIS DHGANAMYQK MNTNLQALSA CKETFAKSKS 840 GELIAEKSSP CIQMDYEYVN ILADTPGVKR GLESPSAWKS PWFIDMQYKG SYFISPADTT 900 YDALGLMKRI NVQSASALAD AREVLASGSQ CGNKDFDEEN KENVDAENET GTGKPQNKIM 960 AEARVLDFNE CATPVRTADS SVGGRLTKSL SSPIPSSHLL KKFR

Sequence ? help Back to Top

Protein Sequence Length: 1004 aa Download sequence

MTSDKGKASK KAGEASGQPS TTHEGKVSNE PQRQRSLNGR TTGPTRRSTK GNWTPEEDDI  60
LSRAVQTYNG KNWKKIGTPP YTFCFLTSLS TDILPSFPAE CFPDRTDVQC LHRWQKVLNP  120
ELIKGPWSKE EDDIIVEMVK KYGPKKWSTI AQALPGRIGK QCRERWHNHL NPGINKDAWT  180
QEEEITLIHA HRMYGNKWAE LTKFLPGRTD NSIKNHWNSS VKKKIDSYMS SGLLAQVSRL  240
PLIEHHAHFN SSPAITQQNS EDSDSNAVRE VEDSSGCSQS SLAMVSCSQA QDTNLALSCD  300
LHVNADPSKT EAHDSQSSMC QEGYTSTEGV ASALSEVHCH ASSSRFGSDK LLQQEISQRM  360
DLQMDIDETP GNSMFENNQT ICSTSNNERP MLQYEIAPDM PISVLTNVSG AEPKLHFMSE  420
ADFSSPNCLK SELWQDVSFQ SLLSGPDVVD ADSLSRLNHH SDTHSSEADT HFLAAPNPSH  480
TSNPSSMMMA AYGQDPSLSV PQSLIPNGLS DVADEKSREM QVSGSEMITC MHDSFGDSEQ  540
FATPGSTDGR HGASAIIERI PEYGDKQLTD AEEPASSMAK EPPLAQGEAA SDEKQDKGAL  600
FYEPPRFPSM DVPFVSCDLV TSGDLQEYSP LGIRQLMRST MSVTTPLRLW GSPTHDESPD  660
VVLKSAAKSF ISTPSILKKR PRDLSSPTLE KGIEKKSRTE QDSGVLGTSS VSAQTSCMHA  720
IKDKGIVTES VFCTNRSSSF KPLEKKLEFC DENKGNLGES EQAKDGRNAQ NNHPVDEHAR  780
GEQCSTANMV NINDEPPATV LVEHKGNDIS DHGANAMYQK MNTNLQALSA CKETFAKSKS  840
GELIAEKSSP CIQMDYEYVN ILADTPGVKR GLESPSAWKS PWFIDMQYKG SYFISPADTT  900
YDALGLMKRI NVQSASALAD AREVLASGSQ CGNKDFDEEN KENVDAENET GTGKPQNKIM  960
AEARVLDFNE CATPVRTADS SVGGRLTKSL SSPIPSSHLL KKFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	1e-158	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG020650.5