PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC3AG020650.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 982aa MW: 107766 Da PI: 5.3564 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.7 | 6.4e-19 | 50 | 96 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l +av+ + g++Wk+Ia++++ Rt+ qc +rwqk+l TRIDC3AG020650.2 50 KGNWTPEEDDILSRAVQTYNGKNWKKIAECFP-DRTDVQCLHRWQKVL 96 79******************************.************986 PP | |||||||
2 | Myb_DNA-binding | 61.2 | 2.2e-19 | 102 | 148 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd+++v+ vk++G++ W+tIa+ ++ gR +kqc++rw+++l TRIDC3AG020650.2 102 KGPWSKEEDDIIVEMVKKYGPKKWSTIAQALP-GRIGKQCRERWHNHL 148 79******************************.*************97 PP | |||||||
3 | Myb_DNA-binding | 49.1 | 1.3e-15 | 154 | 196 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+ l++a++++G++ W+ + ++ gRt++++k++w+ TRIDC3AG020650.2 154 KDAWTQEEEITLIHAHRMYGNK-WAELTKFLP-GRTDNSIKNHWN 196 679*******************.*********.***********8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 982 aa Download sequence |
MTSDKGKASK KAGEASGQPS TTHEGKVSNE PQRQRSLNGR TTGPTRRSTK GNWTPEEDDI 60 LSRAVQTYNG KNWKKIAECF PDRTDVQCLH RWQKVLNPEL IKGPWSKEED DIIVEMVKKY 120 GPKKWSTIAQ ALPGRIGKQC RERWHNHLNP GINKDAWTQE EEITLIHAHR MYGNKWAELT 180 KFLPGRTDNS IKNHWNSSVK KKIDSYMSSG LLAQVSRLPL IEHHAHFNSS PAITQQNSED 240 SDSNAVREVE DSSGCSQSSL AMVSCSQAQD TNLALSCDLH VNADPSKTEA HDSQSSMCQE 300 GYTSTEGVAS ALSEVHCHAS SSRFGSDKLL QQEISQRMDL QMDIDETPGN SMFENNQTIC 360 STSNNERPML QYEIAPDMPI SVLTNVSGAE PKLHFMSEAD FSSPNCLKSE LWQDVSFQSL 420 LSGPDVVDAD SLSRLNHHSD THSSEADTHF LAAPNPSHTS NPSSMMMAAY GQDPSLSVPQ 480 SLIPNGLSDV ADEKSREMQV SGSEMITCMH DSFGDSEQFA TPGSTDGRHG ASAIIERIPE 540 YGDKQLTDAE EPASSMAKEP PLAQGEAASD EKQDKGALFY EPPRFPSMDV PFVSCDLVTS 600 GDLQEYSPLG IRQLMRSTMS VTTPLRLWGS PTHDESPDVV LKSAAKSFIS TPSILKKRPR 660 DLSSPTLEKG IEKKSRTEQD SGVLGTSSVS AQTSCMHAIK DKGIVTESVF CTNRSSSFKP 720 LEKKLEFCDE NKGNLGESEQ AKDGRNAQNN HPVDEHARGE QCSTANMVNI NDEPPATVLV 780 EHKGNDISDH GANAMYQKMN TNLQALSACK ETFAKSKSGE LIAEKSSPCI QMDYEYVNIL 840 ADTPGVKRGL ESPSAWKSPW FIDMQYKGSY FISPADTTYD ALGLMKRINV QSASALADAR 900 EVLASGSQCG NKDFDEENKE NVDAENETGT GKPQNKIMAE ARVLDFNECA TPVRTADSSV 960 GGRLTKSLSS PIPSSHLLKK FR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G32730.2 | 1e-163 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC3AG020650.2 |