PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG020650.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 867aa MW: 94790.2 Da PI: 5.0554 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 35.5 | 2.4e-11 | 2 | 33 | 16 | 48 |
HHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 16 vkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 vk++G++ W+tIa+ ++ gR +kqc++rw+++l TRIDC3AG020650.1 2 VKKYGPKKWSTIAQALP-GRIGKQCRERWHNHL 33 9****************.*************97 PP | |||||||
2 | Myb_DNA-binding | 49.3 | 1.2e-15 | 39 | 81 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+ l++a++++G++ W+ + ++ gRt++++k++w+ TRIDC3AG020650.1 39 KDAWTQEEEITLIHAHRMYGNK-WAELTKFLP-GRTDNSIKNHWN 81 679*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 867 aa Download sequence |
MVKKYGPKKW STIAQALPGR IGKQCRERWH NHLNPGINKD AWTQEEEITL IHAHRMYGNK 60 WAELTKFLPG RTDNSIKNHW NSSVKKKIDS YMSSGLLAQV SRLPLIEHHA HFNSSPAITQ 120 QNSEDSDSNA VREVEDSSGC SQSSLAMVSC SQAQDTNLAL SCDLHVNADP SKTEAHDSQS 180 SMCQEGYTST EGVASALSEV HCHASSSRFG SDKLLQQEIS QRMDLQMDID ETPGNSMFEN 240 NQTICSTSNN ERPMLQYEIA PDMPISVLTN VSGAEPKLHF MSEADFSSPN CLKSELWQDV 300 SFQSLLSGPD VVDADSLSRL NHHSDTHSSE ADTHFLAAPN PSHTSNPSSM MMAAYGQDPS 360 LSVPQSLIPN GLSDVADEKS REMQVSGSEM ITCMHDSFGD SEQFATPGST DGRHGASAII 420 ERIPEYGDKQ LTDAEEPASS MAKEPPLAQG EAASDEKQDK GALFYEPPRF PSMDVPFVSC 480 DLVTSGDLQE YSPLGIRQLM RSTMSVTTPL RLWGSPTHDE SPDVVLKSAA KSFISTPSIL 540 KKRPRDLSSP TLEKGIEKKS RTEQDSGVLG TSSVSAQTSC MHAIKDKGIV TESVFCTNRS 600 SSFKPLEKKL EFCDENKGNL GESEQAKDGR NAQNNHPVDE HARGEQCSTA NMVNINDEPP 660 ATVLVEHKGN DISDHGANAM YQKMNTNLQA LSACKETFAK SKSGELIAEK SSPCIQMDYE 720 YVNILADTPG VKRGLESPSA WKSPWFIDMQ YKGSYFISPA DTTYDALGLM KRINVQSASA 780 LADAREVLAS GSQCGNKDFD EENKENVDAE NETGTGKPQN KIMAEARVLD FNECATPVRT 840 ADSSVGGRLT KSLSSPIPSS HLLKKFR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32730.2 | 1e-111 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG020650.1 |