PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG018470.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 360aa MW: 37896 Da PI: 5.8932

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG018470.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	71.8	2.2e-22	1	81	19	104
TCP 19 dRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...............ssssaseceaesssssasnsssgkaaksaak 96 dRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai+ l + ++++s+++++s +s++ TRIDC3AG018470.2 1 DRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKDAIDNLDTLpawqptavapsasnaAAPPSSSTQPDSADNSDD------------- 80 8**********************************************666666555444333222222222222222222............. PP TCP 97 skksqksa 104 + TRIDC3AG018470.2 81 -------Q 81 .......1 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
DRRVRLSAHT AIQFYDVQDR LGYDRPSKAV DWLIKNAKDA IDNLDTLPAW QPTAVAPSAS 60 NAAAPPSSST QPDSADNSDD QAQAITIAHS SFDFAGSGGA GGATGGISFL PPSLDSDSIA 120 DTIKSFFPMG GTAGGEPSSS TVAAHSSAMG FQGYTPDLLS RTGSQSQELR LSLQPLPDPM 180 FHHHHHQQQQ QQEQHRSHGH DGNGTGQQAL FPGAASYSFG GGGAMWGEQA ASQRMMPWNV 240 ADPGGGSTGG YLFNVSQQAA HMQAALSGQS QFFFQRGPLQ SSNQPSDRGW PETVEADDNH 300 PMQQQQQQHQ GGLNPSVSAI GFGPGVSFSG FRVPARMQGN EEHNGGNGDK PPSVSSASHH

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

DRRVRLSAHT AIQFYDVQDR LGYDRPSKAV DWLIKNAKDA IDNLDTLPAW QPTAVAPSAS  60
NAAAPPSSST QPDSADNSDD QAQAITIAHS SFDFAGSGGA GGATGGISFL PPSLDSDSIA  120
DTIKSFFPMG GTAGGEPSSS TVAAHSSAMG FQGYTPDLLS RTGSQSQELR LSLQPLPDPM  180
FHHHHHQQQQ QQEQHRSHGH DGNGTGQQAL FPGAASYSFG GGGAMWGEQA ASQRMMPWNV  240
ADPGGGSTGG YLFNVSQQAA HMQAALSGQS QFFFQRGPLQ SSNQPSDRGW PETVEADDNH  300
PMQQQQQQHQ GGLNPSVSAI GFGPGVSFSG FRVPARMQGN EEHNGGNGDK PPSVSSASHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	6e-25	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG018470.2