PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG017410.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | DBB | ||||||||
Protein Properties | Length: 255aa MW: 27281.7 Da PI: 4.6852 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 17.8 | 6.8e-06 | 4 | 44 | 5 | 39 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e e++ C ++ lC+ C H H + TRIDC3AG017410.1 4 LCSACEAAEARVVCCADEAALCARCDRDVHAAnrlagkHHR 44 7******99******************99955677778554 PP | |||||||
2 | zf-B_box | 29.4 | 1.7e-09 | 59 | 99 | 3 | 37 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 +++C+ ++e ++ +fC +++ llC++C ++ H H TRIDC3AG017410.1 59 APNCDICQEGHAYFFCVEDRALLCRSCDVAVHTAnafvsaH 99 689******88*******************99545566666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MKVLCSACEA AEARVVCCAD EAALCARCDR DVHAANRLAG KHHRLPLLSA ASNPPAVSAP 60 NCDICQEGHA YFFCVEDRAL LCRSCDVAVH TANAFVSAHR RFLLTGVQVG LEPDEQEESV 120 PEPEPEPQPP NNASSAPLPP PMCHRKRSPT PLYSDGDIDW AAGSDVGITG NLPDWSVIDE 180 QFGSATPAMR PAEPEVIKAP PKKSPRVAVT AASAALFGGS MPDWPLDEFF GFTEFNSGFG 240 FAENGTSKEI NPRLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78600.1 | 2e-30 | DBB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG017410.1 |