PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC3AG013850.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 1108aa MW: 124268 Da PI: 7.6037

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG013850.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	43.6	5.1e-14	34	85	6	57
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qV++WF+ rR ke++ TRIDC3AG013850.7 34 KKSPLQIQMLESFYSEVQYPKPEDLTEYAASVGLTYNQVRIWFKERRRKERR 85 66899*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1108 aa Download sequence
SGLRCLRPVR GLWQLGFEMM AKGFLAKSDN AGTKKSPLQI QMLESFYSEV QYPKPEDLTE 60 YAASVGLTYN QVRIWFKERR RKERRHMEAA EVHVETQASA RSNWPRCSSS RSSNSSQSPM 120 QDTTGHHSYQ DQSVLKKRKI MSPTAQRSTL PFENNDPVRK HGKGKGLMTV WHAMYSQTAE 180 IQDCSSFIDE SGCLRSLRPF EDFGGKLAQK QTLPRKKVNK KSRPAPSKRK VTCGRVTDLK 240 EHPLVECHLS VDESESSELR TEHATLVDDE ELELSELQAG PNPLRCSAHI SSTGRHGCPL 300 CKDLLARFPP TSVRMKQPFP TKPWESSPEM VKKLFQVVRF VYTHFGSMDV HPFTFDEFAQ 360 AFHDKDSLLL GKVHVSLLKL LMLNTERGSG SVFVPRSSKD SRFSSFLNFV REQEFDVNFW 420 IKSLNSLTWV EILRQVLVAS GFGSDHHMLN RNFFNKEKNQ MVKYGLRPRT LKGELFALLS 480 KKGSGGLKVA ELAKSPQIIG LNLSGASEVE QLIFSTLSSD ITLFEKIAPS AYRLRVDPRI 540 KGKEDSRSDT EDSGTVDDDG DASSSGDESD GPQESYPEHE SRIIRWRQKN VHKNMNKCSE 600 IDESYSGERW LLGLMEGEYS DLSIDEKLDC LVALIDVVSG AGSVPRLEEP QSVLSNIQRA 660 QSHASGGKIK KCTRTIYQSS DEYLNRPGSS HSFDSSMQGQ SGSLRSQDYI ADSGANESPT 720 GFAHQPQIVL LGSDRRYNNY WLFLGPCRAD DPGHRRVYFE SSEDGHWEVI DSPQDLLSLL 780 SVLDIRGTRE AHLLASMKKR QSCLFEGMKK HLEDGCVVAL TASSDSSRSE TSSGNRYSPK 840 PSSGDGASPL SDIDSASVPT YLAGNLQNAS SAIGIGVGRR SDEKMLKWER LQALDKWIWT 900 SFYSSLTAVK CGKRSFKESL VHCESCHDLY WRDEKHCRIC HSTFEVGFDL EERYAIHAAT 960 CREPEDLYDV PNHKVLPSQL QALKAAIHAI EARMPTAAFT GLWMKSSHNL WVKRLRRTSS 1020 LPELLQVLVD FVGAIDEDWL YQRSSAVSFS SYVDDITVYF QTMPQTTSAV ALWVVKLDAL 1080 IAPHLAQADS GRGLGKGSIQ TSMYLADS

Sequence ? help Back to Top

Protein Sequence Length: 1108 aa Download sequence

SGLRCLRPVR GLWQLGFEMM AKGFLAKSDN AGTKKSPLQI QMLESFYSEV QYPKPEDLTE  60
YAASVGLTYN QVRIWFKERR RKERRHMEAA EVHVETQASA RSNWPRCSSS RSSNSSQSPM  120
QDTTGHHSYQ DQSVLKKRKI MSPTAQRSTL PFENNDPVRK HGKGKGLMTV WHAMYSQTAE  180
IQDCSSFIDE SGCLRSLRPF EDFGGKLAQK QTLPRKKVNK KSRPAPSKRK VTCGRVTDLK  240
EHPLVECHLS VDESESSELR TEHATLVDDE ELELSELQAG PNPLRCSAHI SSTGRHGCPL  300
CKDLLARFPP TSVRMKQPFP TKPWESSPEM VKKLFQVVRF VYTHFGSMDV HPFTFDEFAQ  360
AFHDKDSLLL GKVHVSLLKL LMLNTERGSG SVFVPRSSKD SRFSSFLNFV REQEFDVNFW  420
IKSLNSLTWV EILRQVLVAS GFGSDHHMLN RNFFNKEKNQ MVKYGLRPRT LKGELFALLS  480
KKGSGGLKVA ELAKSPQIIG LNLSGASEVE QLIFSTLSSD ITLFEKIAPS AYRLRVDPRI  540
KGKEDSRSDT EDSGTVDDDG DASSSGDESD GPQESYPEHE SRIIRWRQKN VHKNMNKCSE  600
IDESYSGERW LLGLMEGEYS DLSIDEKLDC LVALIDVVSG AGSVPRLEEP QSVLSNIQRA  660
QSHASGGKIK KCTRTIYQSS DEYLNRPGSS HSFDSSMQGQ SGSLRSQDYI ADSGANESPT  720
GFAHQPQIVL LGSDRRYNNY WLFLGPCRAD DPGHRRVYFE SSEDGHWEVI DSPQDLLSLL  780
SVLDIRGTRE AHLLASMKKR QSCLFEGMKK HLEDGCVVAL TASSDSSRSE TSSGNRYSPK  840
PSSGDGASPL SDIDSASVPT YLAGNLQNAS SAIGIGVGRR SDEKMLKWER LQALDKWIWT  900
SFYSSLTAVK CGKRSFKESL VHCESCHDLY WRDEKHCRIC HSTFEVGFDL EERYAIHAAT  960
CREPEDLYDV PNHKVLPSQL QALKAAIHAI EARMPTAAFT GLWMKSSHNL WVKRLRRTSS  1020
LPELLQVLVD FVGAIDEDWL YQRSSAVSFS SYVDDITVYF QTMPQTTSAV ALWVVKLDAL  1080
IAPHLAQADS GRGLGKGSIQ TSMYLADS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	136	165	KKRKIMSPTAQRSTLPFENNDPVRKHGKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	1e-137	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG013850.7