PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG013850.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 1036aa MW: 116313 Da PI: 8.0976

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG013850.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	43.7	4.7e-14	39	90	6	57
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qV++WF+ rR ke++ TRIDC3AG013850.5 39 KKSPLQIQMLESFYSEVQYPKPEDLTEYAASVGLTYNQVRIWFKERRRKERR 90 66899*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1036 aa Download sequence
PRASSSGLRC LRPVRGLWQL GFEMMAKGFL AKSDNAGTKK SPLQIQMLES FYSEVQYPKP 60 EDLTEYAASV GLTYNQVRIW FKERRRKERR HMEAAEVHVE TQASARSNWP RCSSSRSSNS 120 SQSPMQVADT TGHHSYQDQS VLKKRKIMSP TAQRSTLPFE NNDPVRKHGK GKGLMTVWHA 180 MYSQTAEIQD CSSFIDESGC LRSLRPFEDF GGKLAQKQTL PRKKVNKKSR PAPSKRKVTC 240 GRVTDLKEHP LVECHLSVDE SESSELRTEH ATLVDDEELE LSELQAGPNP LRCSAHISST 300 GRHGCPLCKD LLARFPPTSV RMKQPFPTKP WESSPEMVKK LFQVVRFVYT HFGSMDVHPF 360 TFDEFAQAFH DKDSLLLGKV HVSLLKLLML NTERGSGSVF VPRSSKDSRF SSFLNFVREQ 420 EFDVNFWIKS LNSLTWVEIL RQVLVASGFG SDHHMLNRNF FNKEKNQMVK YGLRPRTLKG 480 ELFALLSKKG SGGLKVAELA KSPQIIGLNL SGASEVEQLI FSTLSSDITL FEKIAPSAYR 540 LRVDPRIKGK EDSRSDTEDS GTVDDDGDAS SSGDESDGPQ ESYPEHESRI IRWRQKNVHK 600 NMNKCSEIDE SYSGERWLLG LMEGEYSDLS IDEKLDCLVA LIDVVSGAGS VPRLEEPQSV 660 LSNIQRAQSH ASGGKIKKCT RTIYQSSDEY LNRPGSSHSF DSSMQGQSGS LRSQDYIADS 720 GANESPTGFA HQPQIVLLGS DRRYNNYWLF LGPCRADDPG HRRVYFESSE DGHWEVIDSP 780 QDLLSLLSVL DIRGTREAHL LASMKKRQSC LFEGMKKHLE DGCVVALTAS SDSSRSETSS 840 GNRYSPKPSS GDGASPLSDI DSASVPTYLA GNLQNASSAI GIGVGRRSDE KMLKWERLQA 900 LDKWIWTSFY SSLTAVKCGK RSFKESLVHC ESCHDLYWRD EKHCRICHST FEVGFDLEER 960 YAIHAATCRE PEDLYDVPNH KVLPSQLQAL KAAIHAIEAR MPTAAFTGLW MKSSHNLWVK 1020 RLRRTSSLPE LLQGSC

Sequence ? help Back to Top

Protein Sequence Length: 1036 aa Download sequence

PRASSSGLRC LRPVRGLWQL GFEMMAKGFL AKSDNAGTKK SPLQIQMLES FYSEVQYPKP  60
EDLTEYAASV GLTYNQVRIW FKERRRKERR HMEAAEVHVE TQASARSNWP RCSSSRSSNS  120
SQSPMQVADT TGHHSYQDQS VLKKRKIMSP TAQRSTLPFE NNDPVRKHGK GKGLMTVWHA  180
MYSQTAEIQD CSSFIDESGC LRSLRPFEDF GGKLAQKQTL PRKKVNKKSR PAPSKRKVTC  240
GRVTDLKEHP LVECHLSVDE SESSELRTEH ATLVDDEELE LSELQAGPNP LRCSAHISST  300
GRHGCPLCKD LLARFPPTSV RMKQPFPTKP WESSPEMVKK LFQVVRFVYT HFGSMDVHPF  360
TFDEFAQAFH DKDSLLLGKV HVSLLKLLML NTERGSGSVF VPRSSKDSRF SSFLNFVREQ  420
EFDVNFWIKS LNSLTWVEIL RQVLVASGFG SDHHMLNRNF FNKEKNQMVK YGLRPRTLKG  480
ELFALLSKKG SGGLKVAELA KSPQIIGLNL SGASEVEQLI FSTLSSDITL FEKIAPSAYR  540
LRVDPRIKGK EDSRSDTEDS GTVDDDGDAS SSGDESDGPQ ESYPEHESRI IRWRQKNVHK  600
NMNKCSEIDE SYSGERWLLG LMEGEYSDLS IDEKLDCLVA LIDVVSGAGS VPRLEEPQSV  660
LSNIQRAQSH ASGGKIKKCT RTIYQSSDEY LNRPGSSHSF DSSMQGQSGS LRSQDYIADS  720
GANESPTGFA HQPQIVLLGS DRRYNNYWLF LGPCRADDPG HRRVYFESSE DGHWEVIDSP  780
QDLLSLLSVL DIRGTREAHL LASMKKRQSC LFEGMKKHLE DGCVVALTAS SDSSRSETSS  840
GNRYSPKPSS GDGASPLSDI DSASVPTYLA GNLQNASSAI GIGVGRRSDE KMLKWERLQA  900
LDKWIWTSFY SSLTAVKCGK RSFKESLVHC ESCHDLYWRD EKHCRICHST FEVGFDLEER  960
YAIHAATCRE PEDLYDVPNH KVLPSQLQAL KAAIHAIEAR MPTAAFTGLW MKSSHNLWVK  1020
RLRRTSSLPE LLQGSC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	143	172	KKRKIMSPTAQRSTLPFENNDPVRKHGKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	1e-114	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG013850.5