PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG013850.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 1037aa MW: 116592 Da PI: 8.241

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG013850.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	43.7	4.7e-14	42	93	6	57
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qV++WF+ rR ke++ TRIDC3AG013850.4 42 KKSPLQIQMLESFYSEVQYPKPEDLTEYAASVGLTYNQVRIWFKERRRKERR 93 66899*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1037 aa Download sequence
HRRPRASSSG LRCLRPVRGL WQLGFEMMAK GFLAKSDNAG TKKSPLQIQM LESFYSEVQY 60 PKPEDLTEYA ASVGLTYNQV RIWFKERRRK ERRHMEAAEV HVETQASARS NWPRCSSSRS 120 SNSSQSPMQD TTGHHSYQDQ SVLKKRKIMS PTAQRSTLPF ENNDPVRKHG KGKGLMTVWH 180 AMYSQTAEIQ DCSSFIDESG CLRSLRPFED FGGKLAQKQT LPRKKVNKKS RPAPSKRKVT 240 CGRVTDLKEH PLVECHLSVD ESESSELRTE HATLVDDEEL ELSELQAGPN PLRCSAHISS 300 TGRHGCPLCK DLLARFPPTS VRMKQPFPTK PWESSPEMVK KLFQVVRFVY THFGSMDVHP 360 FTFDEFAQAF HDKDSLLLGK VHVSLLKLLM LNTERGSGSV FVPRSSKDSR FSSFLNFVRE 420 QEFDVNFWIK SLNSLTWVEI LRQVLVASGF GSDHHMLNRN FFNKEKNQMV KYGLRPRTLK 480 GELFALLSKK GSGGLKVAEL AKSPQIIGLN LSGASEVEQL IFSTLSSDIT LFEKIAPSAY 540 RLRVDPRIKG KEDSRSDTED SGTVDDDGDA SSSGDESDGP QESYPEHESR IIRWRQKNVH 600 KNMNKCSEID ESYSGERWLL GLMEGEYSDL SIDEKLDCLV ALIDVVSGAG SVPRLEEPQS 660 VLSNIQRAQS HASGGKIKKC TRTIYQSSDE YLNRPGSSHS FDSSMQGQSG SLRSQDYIAD 720 SGANESPTGF AHQPQIVLLG SDRRYNNYWL FLGPCRADDP GHRRVYFESS EDGHWEVIDS 780 PQDLLSLLSV LDIRGTREAH LLASMKKRQS CLFEGMKKHL EDGCVVALTA SSDSSRSETS 840 SGNRYSPKPS SGDGASPLSD IDSASVPTYL AGNLQNASSA IGIGVGRRSD EKMLKWERLQ 900 ALDKWIWTSF YSSLTAVKCG KRSFKESLVH CESCHDLYWR DEKHCRICHS TFEVGFDLEE 960 RYAIHAATCR EPEDLYDVPN HKVLPSQLQA LKAAIHAIEA RMPTAAFTGL WMKSSHNLWV 1020 KRLRRTSSLP ELLQGSC

Sequence ? help Back to Top

Protein Sequence Length: 1037 aa Download sequence

HRRPRASSSG LRCLRPVRGL WQLGFEMMAK GFLAKSDNAG TKKSPLQIQM LESFYSEVQY  60
PKPEDLTEYA ASVGLTYNQV RIWFKERRRK ERRHMEAAEV HVETQASARS NWPRCSSSRS  120
SNSSQSPMQD TTGHHSYQDQ SVLKKRKIMS PTAQRSTLPF ENNDPVRKHG KGKGLMTVWH  180
AMYSQTAEIQ DCSSFIDESG CLRSLRPFED FGGKLAQKQT LPRKKVNKKS RPAPSKRKVT  240
CGRVTDLKEH PLVECHLSVD ESESSELRTE HATLVDDEEL ELSELQAGPN PLRCSAHISS  300
TGRHGCPLCK DLLARFPPTS VRMKQPFPTK PWESSPEMVK KLFQVVRFVY THFGSMDVHP  360
FTFDEFAQAF HDKDSLLLGK VHVSLLKLLM LNTERGSGSV FVPRSSKDSR FSSFLNFVRE  420
QEFDVNFWIK SLNSLTWVEI LRQVLVASGF GSDHHMLNRN FFNKEKNQMV KYGLRPRTLK  480
GELFALLSKK GSGGLKVAEL AKSPQIIGLN LSGASEVEQL IFSTLSSDIT LFEKIAPSAY  540
RLRVDPRIKG KEDSRSDTED SGTVDDDGDA SSSGDESDGP QESYPEHESR IIRWRQKNVH  600
KNMNKCSEID ESYSGERWLL GLMEGEYSDL SIDEKLDCLV ALIDVVSGAG SVPRLEEPQS  660
VLSNIQRAQS HASGGKIKKC TRTIYQSSDE YLNRPGSSHS FDSSMQGQSG SLRSQDYIAD  720
SGANESPTGF AHQPQIVLLG SDRRYNNYWL FLGPCRADDP GHRRVYFESS EDGHWEVIDS  780
PQDLLSLLSV LDIRGTREAH LLASMKKRQS CLFEGMKKHL EDGCVVALTA SSDSSRSETS  840
SGNRYSPKPS SGDGASPLSD IDSASVPTYL AGNLQNASSA IGIGVGRRSD EKMLKWERLQ  900
ALDKWIWTSF YSSLTAVKCG KRSFKESLVH CESCHDLYWR DEKHCRICHS TFEVGFDLEE  960
RYAIHAATCR EPEDLYDVPN HKVLPSQLQA LKAAIHAIEA RMPTAAFTGL WMKSSHNLWV  1020
KRLRRTSSLP ELLQGSC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	144	173	KKRKIMSPTAQRSTLPFENNDPVRKHGKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	1e-114	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG013850.4