PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG013850.11

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 1099aa MW: 123268 Da PI: 7.709

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG013850.11	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	43.6	5e-14	28	79	6	57
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qV++WF+ rR ke++ TRIDC3AG013850.11 28 KKSPLQIQMLESFYSEVQYPKPEDLTEYAASVGLTYNQVRIWFKERRRKERR 79 66899*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1099 aa Download sequence
RPVRGLWQLG FEMMAKGFLA KSDNAGTKKS PLQIQMLESF YSEVQYPKPE DLTEYAASVG 60 LTYNQVRIWF KERRRKERRH MEAAEVHVET QASARSNWPR CSSSRSSNSS QSPMQVADTT 120 GHHSYQDQSV LKKRKIMSPT AQRSTLPFEN NDPVRKHGKG KGLMTVWHAM YSQTAEIQDC 180 SSFIDESGCL RSLRPFEDFG GKLAQKQTLP RKKVNKKSRP APSKRKVTCG RVTDLKEHPL 240 VECHLSVDES ESSELRTEHA TLVDDEELEL SELQAGPNPL RCSAHISSTG RHGCPLCKDL 300 LARFPPTSVR MKQPFPTKPW ESSPEMVKKL FQVVRFVYTH FGSMDVHPFT FDEFAQAFHD 360 KDSLLLGKVH VSLLKLLMLN TERGSGSVFV PRSSKDSRFS SFLNFVREQE FDVNFWIKSL 420 NSLTWVEILR QVLVASGFGS DHHMLNRNFF NKEKNQMVKY GLRPRTLKGE LFALLSKKGS 480 GGLKVAELAK SPQIIGLNLS GASEVEQLIF STLSSDITLF EKIAPSAYRL RVDPRIKGKE 540 DSRSDTEDSG TVDDDGDASS SGDESDGPQE SYPEHESRII RWRQKNVHKN MNKCSEIDES 600 YSGERWLLGL MEGEYSDLSI DEKLDCLVAL IDVVSGAGSV PRLEEPQSVL SNIQRAQSHA 660 SGGKIKKCTR TIYQSSDEYL NRPGSSHSFD SSMQGQSGSL RSQDYIADSG ANESPTGFAH 720 QPQIVLLGSD RRYNNYWLFL GPCRADDPGH RRVYFESSED GHWEVIDSPQ DLLSLLSVLD 780 IRGTREAHLL ASMKKRQSCL FEGMKKHLED GCVVALTASS DSSRSETSSG NRYSPKPSSG 840 DGASPLSDID SASVPTYLAG NLQNASSAIG IGVGRRSDEK MLKWERLQAL DKWIWTSFYS 900 SLTAVKCGKR SFKESLVHCE SCHDLYWRDE KHCRICHSTF EVGFDLEERY AIHAATCREP 960 EDLYDVPNHK VLPSQLQALK AAIHAIEARM PTAAFTGLWM KSSHNLWVKR LRRTSSLPEL 1020 LQVLVDFVGA IDEDWLYQRS SAVSFSSYVD DITVYFQTMP QTTSAVALWV VKLDALIAPH 1080 LAQADSGRGL GKGSIQTRA

Sequence ? help Back to Top

Protein Sequence Length: 1099 aa Download sequence

RPVRGLWQLG FEMMAKGFLA KSDNAGTKKS PLQIQMLESF YSEVQYPKPE DLTEYAASVG  60
LTYNQVRIWF KERRRKERRH MEAAEVHVET QASARSNWPR CSSSRSSNSS QSPMQVADTT  120
GHHSYQDQSV LKKRKIMSPT AQRSTLPFEN NDPVRKHGKG KGLMTVWHAM YSQTAEIQDC  180
SSFIDESGCL RSLRPFEDFG GKLAQKQTLP RKKVNKKSRP APSKRKVTCG RVTDLKEHPL  240
VECHLSVDES ESSELRTEHA TLVDDEELEL SELQAGPNPL RCSAHISSTG RHGCPLCKDL  300
LARFPPTSVR MKQPFPTKPW ESSPEMVKKL FQVVRFVYTH FGSMDVHPFT FDEFAQAFHD  360
KDSLLLGKVH VSLLKLLMLN TERGSGSVFV PRSSKDSRFS SFLNFVREQE FDVNFWIKSL  420
NSLTWVEILR QVLVASGFGS DHHMLNRNFF NKEKNQMVKY GLRPRTLKGE LFALLSKKGS  480
GGLKVAELAK SPQIIGLNLS GASEVEQLIF STLSSDITLF EKIAPSAYRL RVDPRIKGKE  540
DSRSDTEDSG TVDDDGDASS SGDESDGPQE SYPEHESRII RWRQKNVHKN MNKCSEIDES  600
YSGERWLLGL MEGEYSDLSI DEKLDCLVAL IDVVSGAGSV PRLEEPQSVL SNIQRAQSHA  660
SGGKIKKCTR TIYQSSDEYL NRPGSSHSFD SSMQGQSGSL RSQDYIADSG ANESPTGFAH  720
QPQIVLLGSD RRYNNYWLFL GPCRADDPGH RRVYFESSED GHWEVIDSPQ DLLSLLSVLD  780
IRGTREAHLL ASMKKRQSCL FEGMKKHLED GCVVALTASS DSSRSETSSG NRYSPKPSSG  840
DGASPLSDID SASVPTYLAG NLQNASSAIG IGVGRRSDEK MLKWERLQAL DKWIWTSFYS  900
SLTAVKCGKR SFKESLVHCE SCHDLYWRDE KHCRICHSTF EVGFDLEERY AIHAATCREP  960
EDLYDVPNHK VLPSQLQALK AAIHAIEARM PTAAFTGLWM KSSHNLWVKR LRRTSSLPEL  1020
LQVLVDFVGA IDEDWLYQRS SAVSFSSYVD DITVYFQTMP QTTSAVALWV VKLDALIAPH  1080
LAQADSGRGL GKGSIQTRA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	132	161	KKRKIMSPTAQRSTLPFENNDPVRKHGKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	1e-137	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG013850.11