PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG013170.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 384aa    MW: 40251 Da    PI: 11.3316
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG013170.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.83.4e-15190234347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT++E+ +++ + ++lG+g+W+ I+r++ ++Rt+ q+ s+ qky
  TRIDC3AG013170.3 190 PWTEDEHRRFLAGLEKLGKGDWRGISRHFVTTRTPTQVASHAQKY 234
                       8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    
GRCQCVAVVG TGVRSPANRQ SPATPFSPIK PRMLRLPAVH TIVLSRGLRA RGIISFFSIL  60
PSSLVGFTVP SIGMARKCSS CGHNGHNSRT CGGHRGVESG GGGGLRLFGV QLQVGAAPLK  120
KSFSMECLSS TASAYYAAAA AVGVAASNSS SSVSSSSSLV SVEESPEKMG HGYLSDGLMG  180
RAQERKKGVP WTEDEHRRFL AGLEKLGKGD WRGISRHFVT TRTPTQVASH AQKYFLRQAG  240
LAQKKRRSSL FDVVEKNGDR GATERRHRLK PDATSSVDAM GLTFPALSLG ASRPRPDAAL  300
PPCLTLMPSC SPPSSMIGAP SASRAPKLPP SLGLVANANP PRQAPDLELK ISSTAARKTD  360
QQAGAAAGSS PSPRTPFFGT IRVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.11e-43MYB_related family protein