PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG013010.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 425aa MW: 46481.6 Da PI: 4.6737

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG013010.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.3	1.5e-32	245	299	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHerFv+av+ LGGsekAtPk +l+lmk + Lt++hvkSHLQkYR+ TRIDC3AG013010.6 245 KTRMRWTPELHERFVDAVNLLGGSEKATPKGVLKLMKADNLTIYHVKSHLQKYRT 299 68****************************************************8 PP
2	Myb_DNA-binding	56.1	8.3e-18	247	298	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++vdav++lGg t+k + + m ++t +++ks++qky+ TRIDC3AG013010.6 247 RMRWTPELHERFVDAVNLLGGSekaTPKGVLKLMKaDNLTIYHVKSHLQKYR 298 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MERITTNSFY TAGIPVTVPS PLPSTTMDES FARLPDAQNV LLERELRRTP LPPHQSTVAP 60 ICGQFHPSTG SVGPLRSPPA VRFSSVPNPE QYNGANPYIS QTPSTGSSSA MIYGSHHEGF 120 EPTFNDFPRD VGPTWCPDPV ESMLGFSDDV PVGNNLTGIS PIAATDELAK QTEWWTDFMN 180 DDWKDIADNA GPPVQSSISV DQSASQQVGT TSVHQSALQQ IVTTQSIESS VVAAPSPSAS 240 SNTSKTRMRW TPELHERFVD AVNLLGGSEK ATPKGVLKLM KADNLTIYHV KSHLQKYRTA 300 RYRPELSEGS SERLEASKEE LPSIDLKGNF DLTEALRLQL ELQKRLHEQL EVQRSLQLRI 360 EEQGKCLQIM IEQQCNPATD KALDASTLAE GLKLSSDPPE SSTVKDVPNN SQNGTTEQAE 420 SGDKE

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MERITTNSFY TAGIPVTVPS PLPSTTMDES FARLPDAQNV LLERELRRTP LPPHQSTVAP  60
ICGQFHPSTG SVGPLRSPPA VRFSSVPNPE QYNGANPYIS QTPSTGSSSA MIYGSHHEGF  120
EPTFNDFPRD VGPTWCPDPV ESMLGFSDDV PVGNNLTGIS PIAATDELAK QTEWWTDFMN  180
DDWKDIADNA GPPVQSSISV DQSASQQVGT TSVHQSALQQ IVTTQSIESS VVAAPSPSAS  240
SNTSKTRMRW TPELHERFVD AVNLLGGSEK ATPKGVLKLM KADNLTIYHV KSHLQKYRTA  300
RYRPELSEGS SERLEASKEE LPSIDLKGNF DLTEALRLQL ELQKRLHEQL EVQRSLQLRI  360
EEQGKCLQIM IEQQCNPATD KALDASTLAE GLKLSSDPPE SSTVKDVPNN SQNGTTEQAE  420
SGDKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	3e-65	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG013010.6