PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG008680.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WOX | ||||||||
Protein Properties | Length: 193aa MW: 20734.9 Da PI: 8.9891 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 47.9 | 2.3e-15 | 27 | 87 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+++++eq+ +Le+ F++ +p ++e +++ l + +++V++WFqNrR + ++ TRIDC3AG008680.2 27 RSRWAPKPEQILILESIFNSgMVNPAKDETARIRLLLerfgAVRDANVFYWFQNRRSRSRR 87 89*****************99*************************************997 PP | |||||||
2 | Wus_type_Homeobox | 105.2 | 4.3e-34 | 26 | 88 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +r+RW+P+peQi iLe++++sG+++P+k+e+ ri+ Le++G+++d+NVfyWFQNr++R+r++ TRIDC3AG008680.2 26 TRSRWAPKPEQILILESIFNSGMVNPAKDETARIRLLLERFGAVRDANVFYWFQNRRSRSRRR 88 689**********************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MDQHHHGQAP AHGGGRSSEG GEPTTTRSRW APKPEQILIL ESIFNSGMVN PAKDETARIR 60 LLLERFGAVR DANVFYWFQN RRSRSRRRAR KLQQSCGGTG DADQLPSNAA AGHGYHGIGT 120 SPYNTMQYGQ LGGGVSAAAA AVNTAPRFLV DDAEGGDDLF AIPRQMGLMA RGGENQYGYP 180 ATDASQLSYQ ATG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17810.1 | 2e-29 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG008680.2 |