PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG006200.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | B3 | ||||||||
Protein Properties | Length: 144aa MW: 15659.4 Da PI: 7.5962 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 89.4 | 2.8e-28 | 1 | 87 | 7 | 85 |
.-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 7 psdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 psdv+k++rlv+pk++ae+h g++ +++ l +ed +g++W+++++y+++s++yvltkGW++Fvk+ gL++gD+v F+++ TRIDC3AG006200.3 1 PSDVGKLNRLVVPKQHAEKHfppttaaaTGSNCKGVLLNFEDGEGKVWRFRYSYWNSSQSYVLTKGWSRFVKETGLRAGDTVAFYRS 87 79******************9999999844446899*************************************************54 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence |
PSDVGKLNRL VVPKQHAEKH FPPTTAAATG SNCKGVLLNF EDGEGKVWRF RYSYWNSSQS 60 YVLTKGWSRF VKETGLRAGD TVAFYRSAYG NDTEDQLFID YKKMNKNDDA ADAAISNENE 120 TGHVAVKLFG VDIAGGGMVG SSGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68840.2 | 8e-48 | RAV family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG006200.3 |