PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG005070.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 259aa    MW: 28154.9 Da    PI: 7.719
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG005070.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.13.5e-173279148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT eEd ll  +++ +G g+W++ ar+ g++Rt+k+c++rw++yl
  TRIDC3AG005070.2 32 RGPWTLEEDNLLMSYIACHGEGRWNLLARCSGLKRTGKSCRLRWLNYL 79
                      89********************************************97 PP
2Myb_DNA-binding51.42.5e-1685128146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg+ T+eE++ ++++++++G++ W++Ia++++ gRt++++k++w++
  TRIDC3AG005070.2  85 RGNLTAEEQLVILELHAKWGNR-WSRIAQHLP-GRTDNEIKNYWRT 128
                       7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MSRRKGAAAA GGGGAGPMEM AAMEEEAAEL RRGPWTLEED NLLMSYIACH GEGRWNLLAR  60
CSGLKRTGKS CRLRWLNYLK PDIKRGNLTA EEQLVILELH AKWGNRWSRI AQHLPGRTDN  120
EIKNYWRTRV QKQARQLKVD ANSAVFRDAV RCYWMPRLLD KMSMAAASTA APPPLMEQHG  180
HGVVTSSQSA AIGSDQLCCY PPAGFDPSPS ASTSGSTAAA ALQPAPVPCF SELNWEDQYC  240
YPSGGDLDGG AGGMELDSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.12e-75MYB family protein