PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG002980.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 235aa    MW: 24389.7 Da    PI: 9.7967
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG002980.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.61.9e-0739105455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC..................TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkas...............kapskKlsKaeiLekAveYIksLq 55 
                         + +E++RR +++    +L +l+P++s               + ++   +  + L  A  YIk+L+
  TRIDC3AG002980.1  39 ERKDVEKNRRLHMKGLCLKLSSLVPPSSahhlrhysstcssppSSNKDAATQLDQLDSAAAYIKQLR 105
                       56889*********************888************96666666****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MKSRRQSGRA GGLAVDTTSS GCGGGGVVGG GGCSASKMER KDVEKNRRLH MKGLCLKLSS  60
LVPPSSAHHL RHYSSTCSSP PSSNKDAATQ LDQLDSAAAY IKQLRARIDH LKRRKQAALT  120
GGCSSSVSAG DYKGAPSTST ALPVIEVRCQ DGSALDVALA SEAGRPFRLH EVIAVLEQEG  180
AEVVSASFSV VGDKIFYTVH SQALCPRIGL DAGRVAQRLR GLAAAAATVS TLLTC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10585.18e-19bHLH family protein