PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG090580.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GATA | ||||||||
Protein Properties | Length: 185aa MW: 20191.7 Da PI: 9.999 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 39.8 | 6.4e-13 | 7 | 35 | 7 | 35 |
GATA 7 tkTplWRrgpdgnktLCnaCGlyyrkkgl 35 t +p WR+gp ++ LCnaCG ++rkkg+ TRIDC2BG090580.3 7 TGSPIWRNGPPEKPVLCNACGTRWRKKGT 35 789*******88888************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MVTAADTGSP IWRNGPPEKP VLCNACGTRW RKKGTLENYT PTRRPQDAEA ETKQHKKKPV 60 RRIVKKQPSS DHNLGNTGDT SNPSGFGSAV SYSGSAQSHA REPLVPSRKK SCIGRRRKPS 120 TVEALAEDLN SIMHQEKLCS GSGVRTIPGS SEEDLLIYHS ETPAGSFEIG YGSMLLTHPF 180 KQASY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47140.1 | 1e-31 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG090580.3 |