PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG090570.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 292aa    MW: 32109.1 Da    PI: 9.5776
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG090570.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA36.56.9e-121542835
              GATA  8 kTplWRrgpdgnktLCnaCGlyyrkkgl 35
                       TplWR+gp  ++ LCnaCG ++r +g+
  TRIDC2BG090570.4 15 GTPLWRNGPPDKPVLCNACGSRWRIRGT 42
                      5********55555**********9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
LSFFWDPGQH LLFSGTPLWR NGPPDKPVLC NACGSRWRIR GTLVNYTPAH RREDTGASEA  60
RPDKLKLKGQ KQPKKRPNRS IVKDEPWSDQ NFWKMGNADT SNRSGSGSAV SYSESCAPYG  120
SVDAREMAGS AQSHAQESLV PSRKKSCVGR RKPSPLETLV ENLNSIMHEE QLCSGSGLGT  180
IPGSSEEDLL IYHSETPASC FEIGYGSMLL THPNSVSEAN SVPAHSKSYA ISQSYLGPAS  240
FTLHSGSNGA RYFTPFCIGC SPTFNTNQRK RGFVLVGMNF IIRSSIFWRA RK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.33e-36GATA family protein