PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG090570.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 252aa    MW: 27239.7 Da    PI: 9.4057
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG090570.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA47.82e-151044135
              GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                      C +C++ ++p WR+gp  ++ LCnaCG ++rkkg+
  TRIDC2BG090570.3 10 CFHCRVMSSPIWRNGPPEKPVLCNACGTRWRKKGT 44
                      ****************88888************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MVKVKKEGPC FHCRVMSSPI WRNGPPEKPV LCNACGTRWR KKGTLENYTP APQVQRKQPK  60
KTSVRTTVKK EPSSDHNSLK TGDAADTFSN NPSAFGSALS YSGSAQSHAQ ESLVPSRKKS  120
CVGRRKPSPL ETLVENLNSI MHEEQLCSGS GLGTIPGSSE EDLLIYHSET PASCFEIGYG  180
SMLLTHPNSV SEANSVPAHS KSYAISQSYL GPASFTLHSG SNGARHELHY PKQHILESKK  240
VGGRGEALPS PL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.32e-35GATA family protein