PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG090080.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 290aa    MW: 32500.2 Da    PI: 6.4225
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG090080.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.52.5e-5381351129
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       +ppGfrFhPt+eelv +yL++kv+++k++l ++i+evd+y++ePwdL++  +++++ewyfFs +d+ky++g+r+nrat++g+Wkatg+dk+v+
  TRIDC2BG090080.6   8 VPPGFRFHPTEEELVGYYLARKVAAQKIDL-DIIQEVDLYRIEPWDLQE-DEQSSSEWYFFSFKDRKYPSGTRTNRATAAGFWKATGRDKPVT 98 
                       69****************************.99**************84.455678************************************* PP

               NAM  94 sk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                       s+ ++ ++g++ktLvfy+grap+g+ktdW++heyrle
  TRIDC2BG090080.6  99 SSrSRGVIGMRKTLVFYRGRAPNGRKTDWIIHEYRLE 135
                       9856678****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
HQQEESCVPP GFRFHPTEEE LVGYYLARKV AAQKIDLDII QEVDLYRIEP WDLQEDEQSS  60
SEWYFFSFKD RKYPSGTRTN RATAAGFWKA TGRDKPVTSS RSRGVIGMRK TLVFYRGRAP  120
NGRKTDWIIH EYRLETSEHA PTEEGWVVCR AFQKPTPNQR ASYVFPAYAA APGLGGYFDA  180
RPWLHGQAGD LHYLQSATGS VGAGRLGFPG QSIQYSAELL DSKQSLFNNI PQLIESPPMT  240
TAVAGCRDAG YDIVQQGQAA AGIDWDFLDS QLSTSQLHEY SATATSHLHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.11e-84NAC family protein