PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG090000.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 176aa    MW: 19956.3 Da    PI: 8.7083
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG090000.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM149.41.8e-46151551127
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...............kvkaeekewyfFskrdkkyatgkrknrat 78 
                       +ppGfrFhPt+eelv +yL++  +++k++l ++i+evd+y++ePwdL++               + +++++e+yfFs +d+ky++g+r+nra 
  TRIDC2BG090000.1  15 VPPGFRFHPTEEELVGYYLARV-AAQKIDL-DIIQEVDLYRIEPWDLQEkcgggrggrgaqqvaEDAQSSSECYFFSFKDRKYPSGTRTNRAK 105
                       69****************9875.5666788.89**************95589999999887543222245599******************** PP

               NAM  79 ksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                       ++g+Wkatg+dk+v+s+    ++g++ktLvfy grap+g+ktdW++heyr
  TRIDC2BG090000.1 106 AAGFWKATGRDKPVMSSrCLGVIGTRKTLVFYPGRAPNGRKTDWIIHEYR 155
                       ***************9756678***************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MLAMDQHNHQ EESCVPPGFR FHPTEEELVG YYLARVAAQK IDLDIIQEVD LYRIEPWDLQ  60
EKCGGGRGGR GAQQVAEDAQ SSSECYFFSF KDRKYPSGTR TNRAKAAGFW KATGRDKPVM  120
SSRCLGVIGT RKTLVFYPGR APNGRKTDWI IHEYRHPHRF FFSTSSSSSC YTSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18060.12e-62NAC family protein