PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG089930.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 160aa    MW: 18566.9 Da    PI: 9.9386
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG089930.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1691.6e-52151542128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.............kvkaeek...ewyfFskrdkkyatgkrknrat 78 
                        pGfrFhPtdeelv +yL++kv+++k++l ++i+evd+y++ePwdL++             + +   +   ewyfFs +d+ky++g+r+nrat
  TRIDC2BG089930.3  15 SPGFRFHPTDEELVGYYLARKVAAQKIDL-DIIQEVDLYRIEPWDLQErcggrggggarpdQED---QsslEWYFFSFKDRKYPSGTRNNRAT 103
                       69***************************.99**************955889888887653222...2346********************** PP

               NAM  79 ksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++g+Wkatg+dk+v+s+ ++ ++g++ktLvfy+grap+g+ktdW++heyrl
  TRIDC2BG089930.3 104 AAGFWKATGRDKPVTSSkRRVVIGMRKTLVFYRGRAPNGRKTDWIIHEYRL 154
                       ***************98566779**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MLAMNKHRQE ESCVSPGFRF HPTDEELVGY YLARKVAAQK IDLDIIQEVD LYRIEPWDLQ  60
ERCGGRGGGG ARPDQEDQSS LEWYFFSFKD RKYPSGTRNN RATAAGFWKA TGRDKPVTSS  120
KRRVVIGMRK TLVFYRGRAP NGRKTDWIIH EYRLHTSEHA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16470GGRGGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18060.16e-71NAC family protein