PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG089840.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 147aa    MW: 16513.9 Da    PI: 9.2977
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG089840.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR135.53.4e-1158128181
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkl 81 
                       +fYn Y+ e+GF +r +ks+ + +  +  +++ vC + g + +e+++         ++r+gC+a++++ +++d+ w++++ 
  TRIDC2BG089840.1  58 EFYNLYSWETGFGIRLAKSRLNVQR-TRCMQEIVCACAGAPLKENSR---------SSRCGCNAMIRLLRSRDAGWYISEH 128
                       6*****************9999444.468899********9987655.........99********************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MVKAKMVRLG KAPDERDMNP DRKTALELSV RAYGEKCQGH VVNPKIGTEF DSLDEAYEFY  60
NLYSWETGFG IRLAKSRLNV QRTRCMQEIV CACAGAPLKE NSRSSRCGCN AMIRLLRSRD  120
AGWYISEHKA SLLTVVFSTN RAKSGGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.14e-11FAR1 family protein