PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG089260.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 433aa    MW: 45169.7 Da    PI: 8.5774
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG089260.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H220.11.8e-06181204123
                       EEETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                       ++CpdCg +F r ++L+ H++t H
  TRIDC2BG089260.2 181 FPCPDCGDVFVRAESLHLHQSTcH 204
                       89********************66 PP
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    
QVPLLRLWRA LPTGWLSGAS SPAGTATRRS TSTTSARCKK KSKKQTQLGC SASICKLRDA  60
SPRRVTLHRP PAEEDPPSGA AAGAGEPCKR RASVSGGGER RVKKPLQQQQ PQQGQGSEAA  120
GAVVVGSSSR HWGSSTASSS SSTAGGGGGS SFRLRRLSGC YECHMVVDPA GGGSSMRAAI  180
FPCPDCGDVF VRAESLHLHQ STCHAVSELG PEDTSRNIIE IIFQSSWLKK QTPVCAVDRI  240
LKVHNAPATL ARFEAYRDAV KARARGGRPG AGRCTADGNE LLRFHCAALA CSLGAGGATH  300
LCDGAGNSSC AACGIVRDGF KFRAPGVRTM ATSGRAHDDA VAVGGEEGEG GGGERRRAML  360
VCRVIAGRVK RRCEGTADKE EVEAASPSAE EEAEAEEEYD SVAGTAGVYS SLDELEVFNP  420
TAILPCFVVV YKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.13e-67C2H2 family protein