PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2BG084520.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 144aa MW: 16246.7 Da PI: 10.4797

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG084520.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.3	3.5e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l+ ++++G g+W++ +++ g+ R++k+c++rw +yl TRIDC2BG084520.9 14 KGPWTPEEDEKLLAHIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52	1.6e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia ++ +Rt++++k++w+++l TRIDC2BG084520.9 67 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLS-RRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 144 aa Download sequence
MGRSLCCDKV GLKKGPWTPE EDEKLLAHIE EHGHGSWRAL PSKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLSRRT DNEIKNYWNT HLKKRLAKMG 120 IDPVTHKAAS GAPVGTADDV RSAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	5e-88	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG084520.9