PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG084520.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 441aa MW: 47697.7 Da PI: 6.7407

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG084520.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.8	2.2e-17	101	148	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l+ ++++G g+W++ +++ g+ R++k+c++rw +yl TRIDC2BG084520.2 101 KGPWTPEEDEKLLAHIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNYL 148 79********************************************97 PP
2	Myb_DNA-binding	49.5	9.8e-16	154	199	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia ++ +Rt++++k++w+++l TRIDC2BG084520.2 154 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLS-RRTDNEIKNYWNTHL 199 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
KLSFTGSNQD GRTCTTILNN AMLHSYFDGV MDVLSSFAVR LNNASCHEIV PVSFFPPSLC 60 STSVELLCTQ LSAPGFRKAA AYYGPTPMGR SLCCDKVGLK KGPWTPEEDE KLLAHIEEHG 120 HGSWRALPSK AGLQRCGKSC RLRWTNYLRP DIKRGKFSLQ EEQTIIQLHA LLGNRWSAIA 180 THLSRRTDNE IKNYWNTHLK KRLAKMGIDP VTHKAASGAP VGTADDVRSA KAAASLSHMA 240 QWESARLEAE GRLARESTMR AAASRPTSVP LHPINLPEPA ASPCLGLLQP WQGAAKLDLE 300 SPTSTLTFIG NNNSVSLGIS ESDPTTWRLR GDDPEREEDS ARRFLRQQQM QGLEGAERGD 360 EHIIGCGEEP WFQETVGVGA GLTDVLLAGS GVGAHGALEC WGESGNGQAE HGGLVSGDGE 420 SSSSYWSGIL GMVVSSEPPF L

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

KLSFTGSNQD GRTCTTILNN AMLHSYFDGV MDVLSSFAVR LNNASCHEIV PVSFFPPSLC  60
STSVELLCTQ LSAPGFRKAA AYYGPTPMGR SLCCDKVGLK KGPWTPEEDE KLLAHIEEHG  120
HGSWRALPSK AGLQRCGKSC RLRWTNYLRP DIKRGKFSLQ EEQTIIQLHA LLGNRWSAIA  180
THLSRRTDNE IKNYWNTHLK KRLAKMGIDP VTHKAASGAP VGTADDVRSA KAAASLSHMA  240
QWESARLEAE GRLARESTMR AAASRPTSVP LHPINLPEPA ASPCLGLLQP WQGAAKLDLE  300
SPTSTLTFIG NNNSVSLGIS ESDPTTWRLR GDDPEREEDS ARRFLRQQQM QGLEGAERGD  360
EHIIGCGEEP WFQETVGVGA GLTDVLLAGS GVGAHGALEC WGESGNGQAE HGGLVSGDGE  420
SSSSYWSGIL GMVVSSEPPF L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-102	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG084520.2