PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG082200.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 373aa    MW: 39742.4 Da    PI: 7.794
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG082200.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.43.5e-052582951254
                       HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       R +++ +++  L++l+ +      +K + a++L +++eYIk L
  TRIDC2BG082200.1 258 RKEKLGDRITALQQLVSPF-----GKTDTASVLHETIEYIKFL 295
                       677888999*******998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    
AADGGKQAKS CTTTASSESP GNNSSLTFQE TASINDPAAA GFADWNNPYM SSGAGNMHGF  60
LQVGHHDMSS RTDQQSMMNA VAAPNNLDLA LQGHHHHQQQ QDDHHRQQQL LSSLGAPELL  120
LSPNSPYGFQ SSLLRSLIEP TGKPAPAAGL LQQYQYQQMG GQTGARGEPL QFTNDAAFWN  180
QSAGFGMGMA APPATDNTSM RAAKQPSPAP RGANLALKTV LEGVGDSSSI VAKKAGGEPA  240
FKKPRMETPS PLPTFKVRKE KLGDRITALQ QLVSPFGKTD TASVLHETIE YIKFLHDQVG  300
VLSAPYLKSG HHQHQVPQYL KSSSNGSPDK SCKDGGEVSL KGRGLCLVPI SSTFAVASDV  360
PVDFWNPFGP QFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.36e-46bHLH family protein