PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG078440.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 222aa    MW: 23991.3 Da    PI: 7.7324
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG078440.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.84e-1375127155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       ++ +hn+ Er RR+++N+ +  Lr+llP a   + kK s  +++ +A +YI +Lq
  TRIDC2BG078440.1  75 KKLSHNAYERDRRKQLNELYLSLRSLLPDA--DHTKKRSIPTTVCRALKYIPELQ 127
                       6789*************************7..35666***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
CHRQLYGDPS ANIFSQLEAQ IFSGQLPPSP PWPNLDVDLD LDLDVLEDDV VRELPGRPAN  60
AASSGSGSGG PGSQKKLSHN AYERDRRKQL NELYLSLRSL LPDADHTKKR SIPTTVCRAL  120
KYIPELQKQV GNLEKKKEKL ASANCKPGVL SVSGSIAPTV SATCLNDKEI MVQISLLRGT  180
DAATALPLSK CINVLENEGL ELVSSSTSCT FGTKCSITSI FR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.16e-22bHLH family protein