PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG078290.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WOX
Protein Properties Length: 208aa    MW: 22709.7 Da    PI: 9.0835
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG078290.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.62.9e-2065124357
                       --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                       +R+++++eq+++Le+l++   r+p+ +++e+++++l    +++ ++V++WFqN++a+e++
  TRIDC2BG078290.1  65 TRWNPSAEQIKVLEALYRGgMRTPNSAQIERITEELgrhgRIEGKNVFYWFQNHKARERQ 124
                       8*****************99**************************************97 PP
2Wus_type_Homeobox115.23.2e-3764126365
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        +tRW+P++eQik+Le+ly+ G+rtPn+++i+rit+eL ++G+ie+kNVfyWFQN+kaRerqkq
   TRIDC2BG078290.1  64 TTRWNPSAEQIKVLEALYRGGMRTPNSAQIERITEELGRHGRIEGKNVFYWFQNHKARERQKQ 126
                        69***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
TAPSTSPPSA LFPYGAFQCL RPLAPKISLP DQPRKLVAPP DVLGRVRNAT KLLSCTVQVP  60
VGGTTRWNPS AEQIKVLEAL YRGGMRTPNS AQIERITEEL GRHGRIEGKN VFYWFQNHKA  120
RERQKQKRAA LLTLSTLDSS SPPATATTKD GAGDDEKEAC DDETMRCKRR CRTWGDGHGD  180
AVAEVAADGC TDNVTLELFP LRPQGKAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46480.13e-39WOX family protein