PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG072200.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 301aa    MW: 34041.1 Da    PI: 10.4567
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG072200.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.23.4e-14187280297
                       EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       +k++++ dv  s  +++p  f+e++  + +es+++tl d++ + W+v + y+++ +    +++GW   + +n L+e+D +vF+l + ++ + +
  TRIDC2BG072200.4 187 IKEMKHTDVYVSYFMIIPDMFVEKFL-P-KESRKMTLWDPQAKPWKVWYEYTGGECPrAAFSAGWGTLAMENYLEERDLCVFELLD-DDYNIK 276
                       58899999999999********9995.3.36789***************99555554599***********************887.455455 PP

                       EEEE CS
                B3  94 vkvf 97 
                       ++v+
  TRIDC2BG072200.4 277 LHVY 280
                       6555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
VRHSPKKSKA EGKRSTALAS KGAASRDSLA ESKRRPPKKP KEAKGKRPQA PCSHSESEGA  60
ASGDSLAELV RRPPKKFRAE GKGSAASSAS KGMASSHSLA VHTGVFAPES VCKDLTKLHK  120
SFGKKHSMKA QFPMFNKSNS ENQPGRVIVK VQRRPELKSQ RRPITQRDEE YAMERTQRFQ  180
SKRPFVIKEM KHTDVYVSYF MIIPDMFVEK FLPKESRKMT LWDPQAKPWK VWYEYTGGEC  240
PRAAFSAGWG TLAMENYLEE RDLCVFELLD DDYNIKLHVY RAVLDISPFA LAPKYRQQGC  300
A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.19e-12B3 family protein