PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG071930.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 211aa MW: 22947.9 Da PI: 8.3506 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44.4 | 3e-14 | 17 | 64 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+h+e+Er+RR+riN +++Lr+l+P+a +++Ka+ L ++v+++++Lq TRIDC2BG071930.1 17 RSHSEAERKRRQRINAHLATLRTLVPSA-----SRMDKAALLGEVVRHVRELQ 64 58*************************9.....7******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MATDGECSTP GKGATVRSHS EAERKRRQRI NAHLATLRTL VPSASRMDKA ALLGEVVRHV 60 RELQGRANDA TEGVVDVVPG ETDEVGVEED DYLLNAGPTD DEPRWRRRVR AWVCCADRPG 120 LMSDLGRAVR SVGSARPVRA EIATVGGRTR SVLELEHVCH EAGPANDRAV ALSTLRAALR 180 TVLFNREELL ATAAAVDGYK RPRLSPVQQL S |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 23 | 28 | ERKRRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38070.1 | 4e-18 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG071930.1 |