PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG071190.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 388aa MW: 42371.5 Da PI: 7.167

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG071190.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	41.5	2.3e-13	293	369	14	89
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 + l +p++f +h + +++ +l g+sW+v l++ +++ r+ ++ GW +F+ +n+L++g+++ F++ g+ + TRIDC2BG071190.1 293 QYLNVPREFSVAHRYAERK---KVLLRMGGESWTVSLKHvhiVRGKTRTSFRYGWHQFCVDNHLRVGETCFFRVLGQgGG 369 56889***9888655...45566799*****9899988888999*********************7765344 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
PSFLPPSLLT PLSLTHPLAS AHTELAKEAR RNCHFGKGEE NQIGQMAAGD VATVFLEMSL 60 GTRLAVSFPA ASTTVADLKR RVSHEHAACF PNYGQIAVQS VKVEQGGSWF HLADSMAVRD 120 AFQFHGANET WHLQVDALPH PQHLDQGMGT EGHSKDSSAA HSEPSCEMLG DQVKVEVGAD 180 SEPSCEMLGD QVKVEVGAEE TLAAEAKGER GSSSRTDPKG SKEAEATSTE QRACDRRLRP 240 RTRVGKTPIT KAANSSGSSE SEEMDVNTVG VDAPPSQFVV MLKECHFVTK NGQYLNVPRE 300 FSVAHRYAER KKVLLRMGGE SWTVSLKHVH IVRGKTRTSF RYGWHQFCVD NHLRVGETCF 360 FRVLGQGGGG DRHVLKVEVR RLDGSYAS

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

PSFLPPSLLT PLSLTHPLAS AHTELAKEAR RNCHFGKGEE NQIGQMAAGD VATVFLEMSL  60
GTRLAVSFPA ASTTVADLKR RVSHEHAACF PNYGQIAVQS VKVEQGGSWF HLADSMAVRD  120
AFQFHGANET WHLQVDALPH PQHLDQGMGT EGHSKDSSAA HSEPSCEMLG DQVKVEVGAD  180
SEPSCEMLGD QVKVEVGAEE TLAAEAKGER GSSSRTDPKG SKEAEATSTE QRACDRRLRP  240
RTRVGKTPIT KAANSSGSSE SEEMDVNTVG VDAPPSQFVV MLKECHFVTK NGQYLNVPRE  300
FSVAHRYAER KKVLLRMGGE SWTVSLKHVH IVRGKTRTSF RYGWHQFCVD NHLRVGETCF  360
FRVLGQGGGG DRHVLKVEVR RLDGSYAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	7e-07	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG071190.1