PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG070230.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 490aa    MW: 51679.6 Da    PI: 8.8048
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG070230.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS194.56.8e-601154882374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn......sseelaalkl.... 83 
                       ++lL  cA av++++l+++q+l   l ela+ +gd+++Rlaay ++AL+ rl    ++  ++a+++ ++ e+        + +l+   +    
  TRIDC2BG070230.1 115 EQLLGPCAVAVEARNLSRVQHLFYVLGELAAFSGDANHRLAAYGLRALSLRLPAaVGPAAAAAVRVPAACESPtpsfagAEPRLFR--Aslik 205
                       689999**********************************************9956677777775544443333445542222222..13479 PP

              GRAS  84 fsevsPilkfshltaNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesg...skeeleetgerLakfAe 170
                       f+evsP++++ + +aN aI + ++ + + +H +D++is+G+QWp+Ll++L+  +  + pps+R+T+v+  +++    +         L ++A+
  TRIDC2BG070230.1 206 FHEVSPWFTLPNTLANAAISQLASAApRPLHLVDIGISHGVQWPTLLESLTRMAagRAPPSVRLTVVAT-SPVpfsASPPGYDFSPHLLRYAK 297
                       ***********************9997889********************9888667799*******98.44457888899999********* PP

              GRAS 171 elgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealey 263
                       ++++++e+      + +  + + + + p+Eal+V+l+++l ++       ++er+++++ vk+l+P++vv++e ++  n++  + +f+  le 
  TRIDC2BG070230.1 298 SIKLDLEIGR----AASLDSAHGFCTTPDEALVVCLQFRLGHVT------AEERTDIIRRVKDLKPHLVVLSELDVGGNGS-AAGEFTARLEL 379
                       ********98....455566799999**************9997......445889*******************998765.5999******* PP

              GRAS 264 ysalfdsleaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee. 354
                        + +++s++a +   + e+r+ +E+e     +  +va + a+   +    e Wr+r+++aGF++v+++ +a+++a++llrk++ +g+++    
  TRIDC2BG070230.1 380 LWRFLESTHAAFKGRDgEDRRLLEAE-----AGTAVAVAAAR---EAMGREGWRDRMTAAGFEQVAFGGEAVESARSLLRKYD-NGWEMSTAa 463
                       ********888744443555555555.....66666666665...3345789*******************************.555555333 PP

              GRAS 355 .....sgslvlgWkdrpLvsvSaWr 374
                             g++ l Wk++p+ ++S Wr
  TRIDC2BG070230.1 464 aatggGGAVALRWKGQPVSFCSLWR 488
                       4666566666**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 490 aa     Download sequence    
SVSLLAGDID LGGSYGWWCD ILPAQKDDIG SVVAQTLSPP APPATSSPLA HPSPSIASPA  60
ASEPSPKKRK SPAHMVSGSG HSSSNNQRRR TEQDRPGGGK KGGGAGSDRD ARWAEQLLGP  120
CAVAVEARNL SRVQHLFYVL GELAAFSGDA NHRLAAYGLR ALSLRLPAAV GPAAAAAVRV  180
PAACESPTPS FAGAEPRLFR ASLIKFHEVS PWFTLPNTLA NAAISQLASA APRPLHLVDI  240
GISHGVQWPT LLESLTRMAA GRAPPSVRLT VVATSPVPFS ASPPGYDFSP HLLRYAKSIK  300
LDLEIGRAAS LDSAHGFCTT PDEALVVCLQ FRLGHVTAEE RTDIIRRVKD LKPHLVVLSE  360
LDVGGNGSAA GEFTARLELL WRFLESTHAA FKGRDGEDRR LLEAEAGTAV AVAAAREAMG  420
REGWRDRMTA AGFEQVAFGG EAVESARSLL RKYDNGWEMS TAAAATGGGG AVALRWKGQP  480
VSFCSLWRPA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197104GGGKKGGG
298105GGGKKGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13840.11e-93GRAS family protein