PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG068290.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 274aa MW: 29817.9 Da PI: 9.3909

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG068290.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.8	4.5e-14	67	118	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ ++ + + a+i+ A++++k+L+ TRIDC2BG068290.5 67 QRMTHIAVERNRRRQMNEYLAALRSLMPES---YAHRGDQASIVGGAIDFVKELE 118 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MTLDALCAVS DVLVYDTFNA AAAARSASAA APAVTAVPVE EGEKAQGRRK RRRRARSCKN 60 REDAESQRMT HIAVERNRRR QMNEYLAALR SLMPESYAHR GDQASIVGGA IDFVKELEQL 120 LQSLEAQKRT LLAQPEQEHK PLPIRDAMPS SSTTVAAAAA ATTTSTDEGK QAAATHDTTG 180 PPFAGFFTYP QYVRLLPPRD DADDRAGAAD IEVTLVETHA SVRVMAPRRP GQLLRMVAGM 240 EALRLTVLHL NVTTLGSLAL YSLSVKKDQK HVGF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	48	54	RRKRRRR
2	49	53	RKRRR
3	49	56	RKRRRRAR
4	68	79	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	1e-49	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG068290.5