PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG066890.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 394aa MW: 43303 Da PI: 7.9024

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG066890.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.5	2.7e-24	125	169	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ TRIDC2BG066890.4 125 DPEPGRCRRTDGKKWRCSKEAAQDSKYCERHMHRGRNRSRKPVET 169 79****************************************997 PP
2	QLQ	59	1.4e-20	64	99	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FTaaQ ++L++Q+l+yKyL+a++PvPp+Ll++i++ TRIDC2BG066890.4 64 TFTAAQYEELEQQALIYKYLVAGVPVPPDLLLPIRR 99 6*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MAMPFASLSP AADHHRSSPI FPFCRSSPLY SVFVCVRRVG EETAHQQQQQ HTMSGARWAA 60 RPATFTAAQY EELEQQALIY KYLVAGVPVP PDLLLPIRRG FDSLASRFYH HHAFGYGSYF 120 GKKLDPEPGR CRRTDGKKWR CSKEAAQDSK YCERHMHRGR NRSRKPVETQ LVATPHHSHS 180 QQLQQHAPAA SAAAFHSHSP YPAIATGGGG SFAVGSAQLH MDNAASPYAT AGAAGNKDFR 240 YSAYGFRTSA MEEHNQFISA AMETAMENYS CRLMPAQNSS FSLASYPMLG TLGDLDQSAI 300 CSLAKTEREP LSFFGGGGGS DDDDSAVKQE NQTLRPFFDE WPKDRDSWPE LQDHDANNSS 360 NAFSATKLSI SIPVTSSDFS TTAGSRSPNG IYSR

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MAMPFASLSP AADHHRSSPI FPFCRSSPLY SVFVCVRRVG EETAHQQQQQ HTMSGARWAA  60
RPATFTAAQY EELEQQALIY KYLVAGVPVP PDLLLPIRRG FDSLASRFYH HHAFGYGSYF  120
GKKLDPEPGR CRRTDGKKWR CSKEAAQDSK YCERHMHRGR NRSRKPVETQ LVATPHHSHS  180
QQLQQHAPAA SAAAFHSHSP YPAIATGGGG SFAVGSAQLH MDNAASPYAT AGAAGNKDFR  240
YSAYGFRTSA MEEHNQFISA AMETAMENYS CRLMPAQNSS FSLASYPMLG TLGDLDQSAI  300
CSLAKTEREP LSFFGGGGGS DDDDSAVKQE NQTLRPFFDE WPKDRDSWPE LQDHDANNSS  360
NAFSATKLSI SIPVTSSDFS TTAGSRSPNG IYSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-46	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG066890.4