PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2BG066890.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 424aa MW: 46208.4 Da PI: 8.0457

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG066890.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.4	3e-24	159	203	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ TRIDC2BG066890.2 159 DPEPGRCRRTDGKKWRCSKEAAQDSKYCERHMHRGRNRSRKPVET 203 79****************************************997 PP
2	QLQ	58.8	1.6e-20	98	133	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FTaaQ ++L++Q+l+yKyL+a++PvPp+Ll++i++ TRIDC2BG066890.2 98 TFTAAQYEELEQQALIYKYLVAGVPVPPDLLLPIRR 133 6*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
IWRCPLPPCR RQPTTTAPPP SSPSAAPPLS TRKPAGQLPL LSSFFISGEL YVEVLANAVT 60 GSGVFVFVCV RRVGEETAHQ QQQQHTMSGA RWAARPATFT AAQYEELEQQ ALIYKYLVAG 120 VPVPPDLLLP IRRGFDSLAS RFYHHHAFGY GSYFGKKLDP EPGRCRRTDG KKWRCSKEAA 180 QDSKYCERHM HRGRNRSRKP VETQLVATPH HSHSQQLQQH APAASAAAFH SHSPYPAIAT 240 GGGGSFAVGS AQLHMDNAAS PYATAGAAGN KDFRYSAYGF RTSAMEEHNQ FISAAMETAM 300 ENYSCRLMPA QNSSFSLASY PMLGTLGDLD QSAICSLAKT EREPLSFFGG GGGSDDDDSA 360 VKQENQTLRP FFDEWPKDRD SWPELQDHDA NNSSNAFSAT KLSISIPVTS SDFSTTAGSR 420 SPNG

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

IWRCPLPPCR RQPTTTAPPP SSPSAAPPLS TRKPAGQLPL LSSFFISGEL YVEVLANAVT  60
GSGVFVFVCV RRVGEETAHQ QQQQHTMSGA RWAARPATFT AAQYEELEQQ ALIYKYLVAG  120
VPVPPDLLLP IRRGFDSLAS RFYHHHAFGY GSYFGKKLDP EPGRCRRTDG KKWRCSKEAA  180
QDSKYCERHM HRGRNRSRKP VETQLVATPH HSHSQQLQQH APAASAAAFH SHSPYPAIAT  240
GGGGSFAVGS AQLHMDNAAS PYATAGAAGN KDFRYSAYGF RTSAMEEHNQ FISAAMETAM  300
ENYSCRLMPA QNSSFSLASY PMLGTLGDLD QSAICSLAKT EREPLSFFGG GGGSDDDDSA  360
VKQENQTLRP FFDEWPKDRD SWPELQDHDA NNSSNAFSAT KLSISIPVTS SDFSTTAGSR  420
SPNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	4e-46	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG066890.2