PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2BG066890.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 252aa MW: 27767.9 Da PI: 9.3946

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG066890.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.4	1.4e-24	122	166	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ TRIDC2BG066890.1 122 DPEPGRCRRTDGKKWRCSKEAAQDSKYCERHMHRGRNRSRKPVET 166 79****************************************997 PP
2	QLQ	59.8	7.6e-21	61	96	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FTaaQ ++L++Q+l+yKyL+a++PvPp+Ll++i++ TRIDC2BG066890.1 61 TFTAAQYEELEQQALIYKYLVAGVPVPPDLLLPIRR 96 6*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
EEREHIWRCP LPPCRRQPTT TAPPPSSPSA APPLSTREET AHQQQQQHTM SGARWAARPA 60 TFTAAQYEEL EQQALIYKYL VAGVPVPPDL LLPIRRGFDS LASRFYHHHA FGYGSYFGKK 120 LDPEPGRCRR TDGKKWRCSK EAAQDSKYCE RHMHRGRNRS RKPVETQLVA TPHHSHSQQL 180 QQHAPAASAA AFHSHSPYPA IATGGGGSFA VGSAQLHMDN AASPYATAGA AGNKDFSNNC 240 HVPFVLSSSQ ET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	4e-47	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG066890.1