PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC2BG066760.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 221aa MW: 25321.6 Da PI: 8.6757 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 70.7 | 3.5e-22 | 43 | 123 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++Yn+YA ++GFs+rks++k++ +n++i ++ vCs++g+re+e++k a+trtgC+a+++ + +++g w v+k++++HnH la TRIDC2BG066760.2 43 DMYNTYAGKIGFSIRKSQTKRR-QNQTISQKYIVCSNQGERETESSK--------ATTRTGCQARVQFSVSREGIWTVQKVVTDHNHYLA 123 58***************98887.7777**************998877........9*******************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 221 aa Download sequence |
LGSQDKMFLC NEQFEDDVVD KVGQALIVPE VGKSFDSEQQ AYDMYNTYAG KIGFSIRKSQ 60 TKRRQNQTIS QKYIVCSNQG ERETESSKAT TRTGCQARVQ FSVSREGIWT VQKVVTDHNH 120 YLASPNKLHK LRSQRRVVEA DRALIGQIRE AGMKPSQVYD FMVAFCGGVD KVPFSKMDCN 180 NEIGKERKKY LESNDAKTLL EYLKSKQRED PTFFYAIQVD E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G38180.1 | 8e-35 | FAR1 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC2BG066760.2 |