PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG066760.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 262aa    MW: 30319.3 Da    PI: 9.2954
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG066760.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.25e-2232112190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       ++Yn+YA ++GFs+rks++k++ +n++i ++  vCs++g+re+e++k        a+trtgC+a+++ + +++g w v+k++++HnH la
  TRIDC2BG066760.1  32 DMYNTYAGKIGFSIRKSQTKRR-QNQTISQKYIVCSNQGERETESSK--------ATTRTGCQARVQFSVSREGIWTVQKVVTDHNHYLA 112
                       58***************98887.7777**************998877........9*******************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
LGSQDKVVDK VGQALIVPEV GKSFDSEQQA YDMYNTYAGK IGFSIRKSQT KRRQNQTISQ  60
KYIVCSNQGE RETESSKATT RTGCQARVQF SVSREGIWTV QKVVTDHNHY LASPNKLHKL  120
RSQRRVVEAD RALIGQIREA GMKPSQVYDF MVAFCGGVDK VPFSKMDCNN EIGRHVIHKH  180
PEKFLPDFKR CVYEDRSEFI FKRKWQELLE EYNLEDNEWM EKLYELRGKW AAIYRDSFTA  240
DMNSTQRSEG VRCASMLSRS ST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-26FAR1 family protein