PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG063950.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 753aa MW: 85655 Da PI: 7.3021

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG063950.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.7	6.1e-21	56	139	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+Y +YA +vGFsvrk k+ ++g +r +vCs+eg+r+++ k r+ +etrtgC a++ + ++ +gk++vt+++++HnH+la TRIDC2BG063950.8 56 KYYVSYAGNVGFSVRKGLWDKTAKSG-SRSRFYVCSREGFRAKNLPK-----RPCPETRTGCPARFSIMLTPSGKYRVTEFVQDHNHQLA 139 69******************8888.8999*******98877.....9*********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 753 aa Download sequence
RRSAGGQFLG KEDPQTADKP EEKAEEEPEL PPEVVANAGG VPIIGMVFES EEKACKYYVS 60 YAGNVGFSVR KGLWDKTAKS GSRSRFYVCS REGFRAKNLP KRPCPETRTG CPARFSIMLT 120 PSGKYRVTEF VQDHNHQLAG PIDIGMLKSQ RLLSKVQSGN GNAISIPSRY KNYLRTKSTK 180 DMNAGDFGAL TDYFRSMKSD NPSFYYAIQV DENDKAANVF WADARSIFDY HYFSDVICFD 240 MTYKLNDYSR PLALFLGMNH HRQMVIFGAA FLYDETAESF KWLLETFKSA MCGKQPKTIL 300 TDRSAALKEA LDLAWPGTVH RYCLWQIYQD AAKSLAHVFC ISEEFTHDFS HCVFDVEDGQ 360 EFVETWNVIM EKYNLKENKL LNELYEGREN WALPYGRQIF SGDIKSMVRA ETLGIRMKEY 420 LGCEKELSPF LKFFESSVEK RRQEEIQADY QASQREPRTP LPLLWQAANL YTPINFELFR 480 KEYEECMDCM VYGCGEFGSL SEYMITVKNR TKEQLVRFDS SDGTVACTCK KFETAGILCC 540 HILKVYELKN VKEIPPQYLL KRWSKDAKLG TVHEIDGFSF DSHIGSCVPE RYAALCRLFY 600 KIASKAAANV ETFSMVASQS DQLNEGIERT LQSTLAAKSS IVHSIKDQLT RMAQNDYPLG 660 NSSEAQKSTG KKMSEVTHRG NCQETNKRQK QRRGHSGEAA AGPREREVNV TDQFLPDQLM 720 QGHYVLGHNF GISTSQNIRD DLNQFGQGFC SSN

Sequence ? help Back to Top

Protein Sequence Length: 753 aa Download sequence

RRSAGGQFLG KEDPQTADKP EEKAEEEPEL PPEVVANAGG VPIIGMVFES EEKACKYYVS  60
YAGNVGFSVR KGLWDKTAKS GSRSRFYVCS REGFRAKNLP KRPCPETRTG CPARFSIMLT  120
PSGKYRVTEF VQDHNHQLAG PIDIGMLKSQ RLLSKVQSGN GNAISIPSRY KNYLRTKSTK  180
DMNAGDFGAL TDYFRSMKSD NPSFYYAIQV DENDKAANVF WADARSIFDY HYFSDVICFD  240
MTYKLNDYSR PLALFLGMNH HRQMVIFGAA FLYDETAESF KWLLETFKSA MCGKQPKTIL  300
TDRSAALKEA LDLAWPGTVH RYCLWQIYQD AAKSLAHVFC ISEEFTHDFS HCVFDVEDGQ  360
EFVETWNVIM EKYNLKENKL LNELYEGREN WALPYGRQIF SGDIKSMVRA ETLGIRMKEY  420
LGCEKELSPF LKFFESSVEK RRQEEIQADY QASQREPRTP LPLLWQAANL YTPINFELFR  480
KEYEECMDCM VYGCGEFGSL SEYMITVKNR TKEQLVRFDS SDGTVACTCK KFETAGILCC  540
HILKVYELKN VKEIPPQYLL KRWSKDAKLG TVHEIDGFSF DSHIGSCVPE RYAALCRLFY  600
KIASKAAANV ETFSMVASQS DQLNEGIERT LQSTLAAKSS IVHSIKDQLT RMAQNDYPLG  660
NSSEAQKSTG KKMSEVTHRG NCQETNKRQK QRRGHSGEAA AGPREREVNV TDQFLPDQLM  720
QGHYVLGHNF GISTSQNIRD DLNQFGQGFC SSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-106	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG063950.8