PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2BG063950.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 887aa MW: 100208 Da PI: 8.7149

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG063950.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.4	7.6e-21	190	273	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+Y +YA +vGFsvrk k+ ++g +r +vCs+eg+r+++ k r+ +etrtgC a++ + ++ +gk++vt+++++HnH+la TRIDC2BG063950.3 190 KYYVSYAGNVGFSVRKGLWDKTAKSG-SRSRFYVCSREGFRAKNLPK-----RPCPETRTGCPARFSIMLTPSGKYRVTEFVQDHNHQLA 273 69******************8888.8999*******98877.....9*********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 887 aa Download sequence
MATTSGGGAA GDPAASSPAP SQPQHPTPRI SHIVRTYLDL SSNSKKRRAA RKNQLKPGGV 60 ETSAAGENKG CGPSGAASLE HSRLLRELGI RVSRYTNEER RDIITRYMQK RSGRQGVNRA 120 AAKVPSRQAL AERRRRSAGG QFLGKEDPQT ADKPEEKAEE EPELPPEVVA NAGGVPIIGM 180 VFESEEKACK YYVSYAGNVG FSVRKGLWDK TAKSGSRSRF YVCSREGFRA KNLPKRPCPE 240 TRTGCPARFS IMLTPSGKYR VTEFVQDHNH QLAGPIDIGM LKSQRLLSKV QSGNGNAISI 300 PSRYKNYLRT KSTKDMNAGD FGALTDYFRS MKSDNPSFYY AIQVDENDKA ANVFWADARS 360 IFDYHYFSDV ICFDMTYKLN DYSRPLALFL GMNHHRQMVI FGAAFLYDET AESFKWLLET 420 FKSAMCGKQP KTILTDRSAA LKEALDLAWP GTVHRYCLWQ IYQDAAKSLA HVFCISEEFT 480 HDFSHCVFDV EDGQEFVETW NVIMEKYNLK ENKLLNELYE GRENWALPYG RQIFSGDIKS 540 MVRAETLGIR MKEYLGCEKE LSPFLKFFES SVEKRRQEEI QADYQASQRE PRTPLPLLWQ 600 AANLYTPINF ELFRKEYEEC MDCMVYGCGE FGSLSEYMIT VKNRTKEQLV RFDSSDGTVA 660 CTCKKFETAG ILCCHILKVY ELKNVKEIPP QYLLKRWSKD AKLGTVHEID GFSFDSHIGS 720 CVPERYAALC RLFYKIASKA AANVETFSMV ASQSDQLNEG IERTLQSTLA AKSSIVHSIK 780 DQLTRMAQND YPLGNSSEAQ KSTGKKMSEV THRGNCQETN KRQKQRRGHS GEAAAGPRER 840 EVNVTDQFLP DQLMQVNVVW LLSVLCRDIM YLAITLVLVP HRTFVTI

Sequence ? help Back to Top

Protein Sequence Length: 887 aa Download sequence

MATTSGGGAA GDPAASSPAP SQPQHPTPRI SHIVRTYLDL SSNSKKRRAA RKNQLKPGGV  60
ETSAAGENKG CGPSGAASLE HSRLLRELGI RVSRYTNEER RDIITRYMQK RSGRQGVNRA  120
AAKVPSRQAL AERRRRSAGG QFLGKEDPQT ADKPEEKAEE EPELPPEVVA NAGGVPIIGM  180
VFESEEKACK YYVSYAGNVG FSVRKGLWDK TAKSGSRSRF YVCSREGFRA KNLPKRPCPE  240
TRTGCPARFS IMLTPSGKYR VTEFVQDHNH QLAGPIDIGM LKSQRLLSKV QSGNGNAISI  300
PSRYKNYLRT KSTKDMNAGD FGALTDYFRS MKSDNPSFYY AIQVDENDKA ANVFWADARS  360
IFDYHYFSDV ICFDMTYKLN DYSRPLALFL GMNHHRQMVI FGAAFLYDET AESFKWLLET  420
FKSAMCGKQP KTILTDRSAA LKEALDLAWP GTVHRYCLWQ IYQDAAKSLA HVFCISEEFT  480
HDFSHCVFDV EDGQEFVETW NVIMEKYNLK ENKLLNELYE GRENWALPYG RQIFSGDIKS  540
MVRAETLGIR MKEYLGCEKE LSPFLKFFES SVEKRRQEEI QADYQASQRE PRTPLPLLWQ  600
AANLYTPINF ELFRKEYEEC MDCMVYGCGE FGSLSEYMIT VKNRTKEQLV RFDSSDGTVA  660
CTCKKFETAG ILCCHILKVY ELKNVKEIPP QYLLKRWSKD AKLGTVHEID GFSFDSHIGS  720
CVPERYAALC RLFYKIASKA AANVETFSMV ASQSDQLNEG IERTLQSTLA AKSSIVHSIK  780
DQLTRMAQND YPLGNSSEAQ KSTGKKMSEV THRGNCQETN KRQKQRRGHS GEAAAGPRER  840
EVNVTDQFLP DQLMQVNVVW LLSVLCRDIM YLAITLVLVP HRTFVTI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-105	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG063950.3