PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG063950.11

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 716aa MW: 81511.5 Da PI: 7.4148

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG063950.11	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.8	5.7e-21	46	129	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+Y +YA +vGFsvrk k+ ++g +r +vCs+eg+r+++ k r+ +etrtgC a++ + ++ +gk++vt+++++HnH+la TRIDC2BG063950.11 46 KYYVSYAGNVGFSVRKGLWDKTAKSG-SRSRFYVCSREGFRAKNLPK-----RPCPETRTGCPARFSIMLTPSGKYRVTEFVQDHNHQLA 129 69******************8888.8999*******98877.....9*********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 716 aa Download sequence
PRQGGPADKP EEKAEEEPEL PPEVVANAGG VPIIGMVFES EEKACKYYVS YAGNVGFSVR 60 KGLWDKTAKS GSRSRFYVCS REGFRAKNLP KRPCPETRTG CPARFSIMLT PSGKYRVTEF 120 VQDHNHQLAG PIDIGMLKSQ RLLSKVQSGN GNAISIPSRY KNYLRTKSTK DMNAGDFGAL 180 TDYFRSMKSD NPSFYYAIQV DENDKAANVF WADARSIFDY HYFSDVICFD MTYKLNDYSR 240 PLALFLGMNH HRQMVIFGAA FLYDETAESF KWLLETFKSA MCGKQPKTIL TDRSAALKEA 300 LDLAWPGTVH RYCLWQIYQD AAKSLAHVFC ISEEFTHDFS HCVFDVEDGQ EFVETWNVIM 360 EKYNLKENKL LNELYEGREN WALPYGRQIF SGDIKSMVRA ETLGIRMKEY LGCEKELSPF 420 LKFFESSVEK RRQEEIQADY QASQREPRTP LPLLWQAANL YTPINFELFR KEYEECMDCM 480 VYGCGEFGSL SEYMITVKNR TKEQLVRFDS SDGTVACTCK KFETAGILCC HILKVYELKN 540 VKEIPPQYLL KRWSKDAKLG TVHEIDGFSF DSHIGSCVPE RYAALCRLFY KIASKAAANV 600 ETFSMVASQS DQLNEGIERT LQSTLAAKSS IVHSIKDQLT RMAQNDYPLG NSSEAQKSTG 660 KKMSEVTHRG NCQETNKRQK QRRGHSGEAA AGPREREVNV TDQFLPDQLM QVNSST

Sequence ? help Back to Top

Protein Sequence Length: 716 aa Download sequence

PRQGGPADKP EEKAEEEPEL PPEVVANAGG VPIIGMVFES EEKACKYYVS YAGNVGFSVR  60
KGLWDKTAKS GSRSRFYVCS REGFRAKNLP KRPCPETRTG CPARFSIMLT PSGKYRVTEF  120
VQDHNHQLAG PIDIGMLKSQ RLLSKVQSGN GNAISIPSRY KNYLRTKSTK DMNAGDFGAL  180
TDYFRSMKSD NPSFYYAIQV DENDKAANVF WADARSIFDY HYFSDVICFD MTYKLNDYSR  240
PLALFLGMNH HRQMVIFGAA FLYDETAESF KWLLETFKSA MCGKQPKTIL TDRSAALKEA  300
LDLAWPGTVH RYCLWQIYQD AAKSLAHVFC ISEEFTHDFS HCVFDVEDGQ EFVETWNVIM  360
EKYNLKENKL LNELYEGREN WALPYGRQIF SGDIKSMVRA ETLGIRMKEY LGCEKELSPF  420
LKFFESSVEK RRQEEIQADY QASQREPRTP LPLLWQAANL YTPINFELFR KEYEECMDCM  480
VYGCGEFGSL SEYMITVKNR TKEQLVRFDS SDGTVACTCK KFETAGILCC HILKVYELKN  540
VKEIPPQYLL KRWSKDAKLG TVHEIDGFSF DSHIGSCVPE RYAALCRLFY KIASKAAANV  600
ETFSMVASQS DQLNEGIERT LQSTLAAKSS IVHSIKDQLT RMAQNDYPLG NSSEAQKSTG  660
KKMSEVTHRG NCQETNKRQK QRRGHSGEAA AGPREREVNV TDQFLPDQLM QVNSST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-107	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG063950.11