PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2BG063950.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 867aa MW: 97795.8 Da PI: 8.755

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG063950.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.4	7.4e-21	197	280	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+Y +YA +vGFsvrk k+ ++g +r +vCs+eg+r+++ k r+ +etrtgC a++ + ++ +gk++vt+++++HnH+la TRIDC2BG063950.1 197 KYYVSYAGNVGFSVRKGLWDKTAKSG-SRSRFYVCSREGFRAKNLPK-----RPCPETRTGCPARFSIMLTPSGKYRVTEFVQDHNHQLA 280 69******************8888.8999*******98877.....9*********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 867 aa Download sequence
PPLRSQTMAT TSGGGAAGDP AASSPAPSQP QHPTPRISHI VRTYLDLSSN SKKRRAARKN 60 QLKPGGVETS AAGENKGCGP SGAASLEHSR LLRELGIRVS RYTNEERRDI ITRYMQKRSG 120 RQGVNRAAAK VPSRQALAER RRRSAGGQFL GKEDPQTADK PEEKAEEEPE LPPEVVANAG 180 GVPIIGMVFE SEEKACKYYV SYAGNVGFSV RKGLWDKTAK SGSRSRFYVC SREGFRAKNL 240 PKRPCPETRT GCPARFSIML TPSGKYRVTE FVQDHNHQLA GPIDIGMLKS QRLLSKVQSG 300 NGNAISIPSR YKNYLRTKST KDMNAGDFGA LTDYFRSMKS DNPSFYYAIQ VDENDKAANV 360 FWADARSIFD YHYFSDVICF DMTYKLNDYS RPLALFLGMN HHRQMVIFGA AFLYDETAES 420 FKWLLETFKS AMCGKQPKTI LTDRSAALKE ALDLAWPGTV HRYCLWQIYQ DAAKSLAHVF 480 CISEEFTHDF SHCVFDVEDG QEFVETWNVI MEKYNLKENK LLNELYEGRE NWALPYGRQI 540 FSGDIKSMVR AETLGIRMKE YLGCEKELSP FLKFFESSVE KRRQEEIQAD YQASQREPRT 600 PLPLLWQAAN LYTPINFELF RKEYEECMDC MVYGCGEFGS LSEYMITVKN RTKEQLVRFD 660 SSDGTVACTC KKFETAGILC CHILKVYELK NVKEIPPQYL LKRWSKDAKL GTVHEIDGFS 720 FDSHIGSCVP ERYAALCRLF YKIASKAAAN VETFSMVASQ SDQLNEGIER TLQSTLAAKS 780 SIVHSIKDQL TRMAQNDYPL GNSSEAQKST GKKMSEVTHR GNCQETNKRQ KQRRGHSGEA 840 AAGPREREVN VTDQFLPDQL MQVNSST

Sequence ? help Back to Top

Protein Sequence Length: 867 aa Download sequence

PPLRSQTMAT TSGGGAAGDP AASSPAPSQP QHPTPRISHI VRTYLDLSSN SKKRRAARKN  60
QLKPGGVETS AAGENKGCGP SGAASLEHSR LLRELGIRVS RYTNEERRDI ITRYMQKRSG  120
RQGVNRAAAK VPSRQALAER RRRSAGGQFL GKEDPQTADK PEEKAEEEPE LPPEVVANAG  180
GVPIIGMVFE SEEKACKYYV SYAGNVGFSV RKGLWDKTAK SGSRSRFYVC SREGFRAKNL  240
PKRPCPETRT GCPARFSIML TPSGKYRVTE FVQDHNHQLA GPIDIGMLKS QRLLSKVQSG  300
NGNAISIPSR YKNYLRTKST KDMNAGDFGA LTDYFRSMKS DNPSFYYAIQ VDENDKAANV  360
FWADARSIFD YHYFSDVICF DMTYKLNDYS RPLALFLGMN HHRQMVIFGA AFLYDETAES  420
FKWLLETFKS AMCGKQPKTI LTDRSAALKE ALDLAWPGTV HRYCLWQIYQ DAAKSLAHVF  480
CISEEFTHDF SHCVFDVEDG QEFVETWNVI MEKYNLKENK LLNELYEGRE NWALPYGRQI  540
FSGDIKSMVR AETLGIRMKE YLGCEKELSP FLKFFESSVE KRRQEEIQAD YQASQREPRT  600
PLPLLWQAAN LYTPINFELF RKEYEECMDC MVYGCGEFGS LSEYMITVKN RTKEQLVRFD  660
SSDGTVACTC KKFETAGILC CHILKVYELK NVKEIPPQYL LKRWSKDAKL GTVHEIDGFS  720
FDSHIGSCVP ERYAALCRLF YKIASKAAAN VETFSMVASQ SDQLNEGIER TLQSTLAAKS  780
SIVHSIKDQL TRMAQNDYPL GNSSEAQKST GKKMSEVTHR GNCQETNKRQ KQRRGHSGEA  840
AAGPREREVN VTDQFLPDQL MQVNSST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-105	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG063950.1