PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG063430.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 198aa MW: 22204.5 Da PI: 12.1667

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG063430.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38.4	3e-12	30	75	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W +eEd l++ v+ +G+++W++I ++ + Rt+k+c++rw + TRIDC2BG063430.3 30 KGPWMAEEDAVLLEHVRTHGPRDWSSIRSKGALQRTGKSCRLRWVN 75 79***********************998889*********87 PP
2	Myb_DNA-binding	42.5	1.5e-13	86	126	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++++E+ +++ +q+G++ W++Ia +++ gRt++++k++w TRIDC2BG063430.3 86 KFSADEERVVIELQAQFGNK-WARIATYLP-GRTDNDVKNFWS 126 79****************.*****.*********5 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
LIRQAMARAP GGAARRRGGR RDGSGEAVRK GPWMAEEDAV LLEHVRTHGP RDWSSIRSKG 60 ALQRTGKSCR LRWVNKLRPN LKTGCKFSAD EERVVIELQA QFGNKWARIA TYLPGRTDND 120 VKNFWSTRQK RLARLLRAPL RARPSKTRSS NTKAPGSSVE SAMVSTYWQR FLPGSCSVRG 180 QLFRRPKLRG CTAHGVPG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60460.1	1e-63	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG063430.3