PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG063420.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 275aa    MW: 28928 Da    PI: 4.9608
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG063420.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.73.3e-1997147155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr+++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  TRIDC2BG063420.3  97 PSYRGVRRRS-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALAIKG 147
                       57*****887.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MEADASHAPT TSSSSVSSST LSTSSSSSSL ATSVLELPKN PKPKHPKKRK RAAADQETDA  60
AAATIGARGD ESSCCSTDED NAASVKAAVS KSGFKHPSYR GVRRRSWGKW VSEIREPRKK  120
SRIWLGTFPT AEMAARAHDV AALAIKGRSA HLNFPELAHE LPRPDSTSPA DIQAAAAKAA  180
ATAAVQCEAE PEHEHEPETP SSSGAVSETP EAAACTEAVP ADSGEVDNAL FDLPDLLLDL  240
RDGLFWSPVW PVALAAEEYD GGCCVGLSEP LLWAE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14150PKPKHPKKRK
24450KHPKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.15e-44ERF family protein